Hs00694372_cn

• Gene Symbol: ATG4D
• Assay Reference Genome Location: Chr.19:10544980 on build GRCh38
• Cytoband: 19p13.2

Target Gene Details

• Entrez Gene ID: 84971
• Gene Name: autophagy related 4D cysteine peptidase
• Gene Aliases: APG4-D, APG4D, AUTL4
• Location: Chr.19:10543894-10553423 on Build GRCh38
• Assay Gene Location: Overlaps Intron 2 - Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ATG4D	NM_001281504.1			NP_001268433.1
	NM_032885.5			NP_116274.3
	NR_104024.1
	NR_104025.1
	XM_006722927.1			XP_006722990.1
	AJ312332.1			CAC85951.1
	AK056210.1			BAB71121.1
	AK223383.1			BAD97103.1
	AK294676.1
	AK314712.1
	AK316454.1
	BC007639.1			AAH07639.1
	BC016845.1			AAH16845.1
	BC068992.1			AAH68992.1
	HY063028.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833744	Chr.19:10458964 - 10635033 on Build GRCh38	Loss	SLC44A2 PDE4A KRI1 ATG4D CDKN2D KEAP1 S1PR5 AP1M2 MIR1238
nsv833745	Chr.19:10539132 - 10727920 on Build GRCh38	Loss	SLC44A2 ILF3 KRI1 QTRT1 ILF3-AS1 ATG4D CDKN2D DNM2 AP1M2 MIR1238 MIR638

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

cysteine protease

Gene Ontology Categories:

Process(es)

autophagosome assembly
mitophagy
C-terminal protein lipidation
protein targeting to membrane
apoptotic process
protein processing
nucleophagy
protein delipidation

Function(s)

cysteine-type endopeptidase activity