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See other LMNTD2 CNV Assays ›
Gene Symbol
LMNTD2
Assay Reference Genome
Location

Chr.11:555051 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00706140_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 256329

Gene Name:

 lamin tail domain containing 2

Gene Aliases:

 C11orf35

Location:

 Chr.11:554850-560780 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 13 - Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMNTD2 NM_173573.2 NP_775844.2
XM_011519965.2 XP_011518267.2
XM_011519967.2 XP_011518269.2
XM_017017476.1 XP_016872965.1
XM_017017477.1 XP_016872966.1
XM_017017478.1 XP_016872967.1
AI539379.1
BC039077.1 AAH39077.1
BX384084.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss RASSF7 HRAS MIR210 LRRC56 MIR210HG LMNTD2 PHRF1 LOC101059906 IRF7 LOC143666 CDHR5
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss RASSF7 MIR210 LMNTD2 PKP3 IFITM5 B4GALNT4 IRF7 ANO9 HRAS LRRC56 RNH1 MIR210HG PGGHG IFITM2 PHRF1 SIGIRR IFITM3 PTDSS2 LOC101059906 IFITM1 LOC143666 CDHR5
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion SCT RASSF7 HRAS MIR210 LRRC56 MIR210HG LMNTD2 PHRF1 LOC101059906 IRF7 LOC143666 CDHR5
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss SCT MUC5AC LMNTD2 PNPLA2 AP2A2 MUC6 DEAF1 PKP3 TOLLIP PDDC1 LOC101927503 POLR2L B4GALNT4 IRF7 MUC2 TSPAN4 MUC5B RPLP2 DRD4 CEND1 LOC171391 CD151 LOC101059906 CDHR5 RASSF7 MIR210 TALDO1 PIDD1 CRACR2B TMEM80 CHID1 SNORA52 MIR6744 SLC25A22 PANO1 EPS8L2 ANO9 HRAS LRRC56 RNH1 MIR210HG PHRF1 SIGIRR PTDSS2 LOC143666
esv3625070 Chr.11:553728 - 559392 on Build GRCh38 Loss LRRC56 LMNTD2
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss SCT MUC5AC LMNTD2 PNPLA2 AP2A2 MUC6 DEAF1 TOLLIP PDDC1 LOC101927503 POLR2L IRF7 MUC2 TSPAN4 MUC5B RPLP2 DRD4 CEND1 LOC171391 CD151 LOC101059906 CDHR5 RASSF7 MIR210 TALDO1 PIDD1 CRACR2B TMEM80 CHID1 SNORA52 MIR6744 SLC25A22 PANO1 EPS8L2 ANO9 HRAS LRRC56 RNH1 MIR210HG TOLLIP-AS1 PHRF1 SIGIRR PTDSS2 LOC143666
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain SCT RASSF7 MIR210 LMNTD2 DEAF1 IRF7 HRAS LRRC56 MIR210HG DRD4 PHRF1 LOC143666 CDHR5
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain SCT RASSF7 MIR210 LMNTD2 DEAF1 IRF7 HRAS LRRC56 RNH1 MIR210HG DRD4 PHRF1 PTDSS2 LOC101059906 LOC143666 CDHR5
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion SCT LMNTD2 PNPLA2 AP2A2 DEAF1 PKP3 PDDC1 POLR2L B4GALNT4 IRF7 TSPAN4 RPLP2 DRD4 CEND1 LOC171391 CD151 LOC101059906 CDHR5 RASSF7 MIR210 TALDO1 PIDD1 CRACR2B TMEM80 CHID1 SNORA52 SLC25A22 PANO1 EPS8L2 ANO9 HRAS LRRC56 RNH1 MIR210HG PHRF1 SIGIRR PTDSS2 LOC143666
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion SCT LMNTD2 PNPLA2 DEAF1 PDDC1 POLR2L IRF7 TSPAN4 RPLP2 DRD4 CEND1 LOC171391 CD151 LOC101059906 CDHR5 RASSF7 MIR210 TALDO1 PIDD1 CRACR2B TMEM80 CHID1 SNORA52 SLC25A22 PANO1 EPS8L2 HRAS LRRC56 RNH1 MIR210HG PHRF1 PTDSS2 LOC143666
nsv469924 Chr.11:549119 - 609887 on Build GRCh38 Gain RASSF7 MIR210 LRRC56 MIR210HG LMNTD2 PHRF1 LOC143666

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s)


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