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See other LMNTD2 CNV Assays ›
Gene Symbol
LMNTD2
Assay Reference Genome
Location

Chr.11:556357 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00708092_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 256329

Gene Name:

 lamin tail domain containing 2

Gene Aliases:

 C11orf35

Location:

 Chr.11:554850-560780 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 10 - Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMNTD2 NM_173573.2 NP_775844.2
XM_011519965.2 XP_011518267.2
XM_011519967.2 XP_011518269.2
XM_017017476.1 XP_016872965.1
XM_017017477.1 XP_016872966.1
XM_017017478.1 XP_016872967.1
XM_017017479.1 XP_016872968.1
AI539379.1
BC039077.1 AAH39077.1
BX384084.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv552854 Chr.11:511805 - 619789 on Build GRCh38 Loss CDHR5 RASSF7 LOC101059906 IRF7 PHRF1 MIR210HG MIR210 LOC143666 LMNTD2 LRRC56 HRAS
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss RNH1 SIGIRR PGGHG IFITM5 PHRF1 MIR210HG LMNTD2 ANO9 B4GALNT4 CDHR5 RASSF7 LOC101059906 IFITM3 IRF7 MIR210 LOC143666 IFITM1 PKP3 LRRC56 PTDSS2 IFITM2 HRAS
nsv951270 Chr.11:528401 - 628100 on Build GRCh38 Deletion CDHR5 RASSF7 LOC101059906 IRF7 PHRF1 MIR210HG SCT MIR210 LOC143666 LMNTD2 LRRC56 HRAS
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss TOLLIP CRACR2B CEND1 SIGIRR RPLP2 DEAF1 PHRF1 MIR210HG LMNTD2 PANO1 B4GALNT4 LOC101927503 PNPLA2 MUC5B CDHR5 RASSF7 LOC101059906 MUC5AC MUC6 SLC25A22 PKP3 LRRC56 PTDSS2 HRAS TALDO1 PIDD1 EPS8L2 RNH1 PDDC1 TMEM80 SNORA52 CHID1 SCT LOC171391 AP2A2 MIR6744 DRD4 ANO9 POLR2L MUC2 IRF7 MIR210 LOC143666 CD151 TSPAN4
esv3625070 Chr.11:553728 - 559392 on Build GRCh38 Loss LMNTD2 LRRC56
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss TOLLIP CRACR2B CEND1 SIGIRR RPLP2 DEAF1 PHRF1 MIR210HG LMNTD2 PANO1 LOC101927503 PNPLA2 MUC5B CDHR5 RASSF7 LOC101059906 MUC5AC MUC6 SLC25A22 LRRC56 PTDSS2 HRAS TALDO1 PIDD1 EPS8L2 RNH1 PDDC1 TMEM80 SNORA52 CHID1 SCT LOC171391 AP2A2 MIR6744 DRD4 ANO9 POLR2L MUC2 TOLLIP-AS1 IRF7 MIR210 LOC143666 CD151 TSPAN4
nsv1039558 Chr.11:534242 - 672091 on Build GRCh38 Gain DEAF1 PHRF1 MIR210HG SCT LMNTD2 DRD4 CDHR5 RASSF7 IRF7 MIR210 LOC143666 LRRC56 HRAS
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion CRACR2B CEND1 SIGIRR RPLP2 DEAF1 PHRF1 MIR210HG LMNTD2 PANO1 B4GALNT4 PNPLA2 CDHR5 RASSF7 LOC101059906 SLC25A22 PKP3 LRRC56 PTDSS2 HRAS TALDO1 PIDD1 EPS8L2 RNH1 PDDC1 TMEM80 SNORA52 CHID1 SCT LOC171391 AP2A2 DRD4 ANO9 POLR2L IRF7 MIR210 LOC143666 CD151 TSPAN4
nsv1053964 Chr.11:491334 - 692433 on Build GRCh38 Gain RNH1 DEAF1 PHRF1 MIR210HG SCT LMNTD2 DRD4 CDHR5 RASSF7 LOC101059906 IRF7 MIR210 LOC143666 LRRC56 PTDSS2 HRAS
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion CRACR2B CEND1 RPLP2 DEAF1 PHRF1 MIR210HG LMNTD2 PANO1 PNPLA2 CDHR5 RASSF7 LOC101059906 SLC25A22 LRRC56 PTDSS2 HRAS TALDO1 PIDD1 EPS8L2 RNH1 PDDC1 TMEM80 SNORA52 CHID1 SCT LOC171391 DRD4 POLR2L IRF7 MIR210 LOC143666 CD151 TSPAN4
nsv469924 Chr.11:549119 - 609887 on Build GRCh38 Gain RASSF7 PHRF1 MIR210HG MIR210 LOC143666 LMNTD2 LRRC56

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s)


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