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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:868579 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00708659_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Exon 19
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 14 2708 NP_001136146.1
NM_001142675.1 13 2818 NP_001136147.1
NM_001142676.1 14 2679 NP_001136148.1
NM_001142677.1 12 2511 NP_001136149.1
NM_023947.3 13 2604 NP_076436.3
AK027711.1 13 2553 BAB55316.1
AK124697.1 13 3180
AK301245.1
BC095409.1 13 2540 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625086 Chr.11:860117 - 882352 on Build GRCh38 Loss CHID1 TSPAN4
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain PDDC1 CD151 LOC171391 CHID1 CEND1 PIDD1 CRACR2B SLC25A22 PANO1 POLR2L TSPAN4 SNORA52 AP2A2 PNPLA2 RPLP2
nsv552887 Chr.11:841284 - 876755 on Build GRCh38 Loss POLR2L CHID1 TSPAN4
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss PDDC1 LOC101927503 CD151 LOC171391 TALDO1 ANO9 PIDD1 SLC25A22 TOLLIP-AS1 PHRF1 IRF7 EPS8L2 PANO1 MIR210HG MUC6 POLR2L RNH1 LOC101059906 SNORA52 TOLLIP MUC5AC DEAF1 HRAS RASSF7 PNPLA2 MIR6744 RPLP2 PTDSS2 CHID1 CEND1 MUC5B MIR210 CDHR5 LOC143666 CRACR2B LMNTD2 SCT TMEM80 LRRC56 MUC2 TSPAN4 DRD4 SIGIRR AP2A2
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PDDC1 CD151 LOC171391 TALDO1 ANO9 PIDD1 SLC25A22 PHRF1 IRF7 EPS8L2 PANO1 MIR210HG POLR2L RNH1 LOC101059906 SNORA52 DEAF1 HRAS RASSF7 PNPLA2 RPLP2 PTDSS2 CHID1 CEND1 MIR210 CDHR5 PKP3 LOC143666 CRACR2B LMNTD2 B4GALNT4 SCT TMEM80 LRRC56 TSPAN4 DRD4 SIGIRR AP2A2
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion LOC101927503 CHID1 MUC5B MOB2 TOLLIP-AS1 BRSK2 MUC2 MUC6 TSPAN4 TOLLIP MUC5AC AP2A2 MIR6744
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PDDC1 CD151 LOC171391 TALDO1 PIDD1 SLC25A22 PHRF1 IRF7 EPS8L2 PANO1 MIR210HG POLR2L RNH1 LOC101059906 SNORA52 DEAF1 HRAS RASSF7 PNPLA2 RPLP2 PTDSS2 CHID1 CEND1 MIR210 CDHR5 LOC143666 CRACR2B LMNTD2 SCT TMEM80 LRRC56 TSPAN4 DRD4
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss PDDC1 CD151 LOC171391 CHID1 CEND1 PIDD1 CRACR2B SLC25A22 PANO1 POLR2L TSPAN4 SNORA52 PNPLA2 RPLP2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PDDC1 LOC101927503 CD151 LOC171391 TALDO1 ANO9 PIDD1 SLC25A22 PHRF1 IRF7 EPS8L2 PANO1 MIR210HG MUC6 POLR2L RNH1 LOC101059906 SNORA52 TOLLIP MUC5AC DEAF1 HRAS RASSF7 PNPLA2 MIR6744 RPLP2 PTDSS2 CHID1 CEND1 MUC5B MIR210 CDHR5 PKP3 LOC143666 CRACR2B LMNTD2 B4GALNT4 SCT TMEM80 LRRC56 MUC2 TSPAN4 DRD4 SIGIRR AP2A2
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain CHID1 TSPAN4 AP2A2 MUC6
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion LOC101927503 CHID1 MUC5B MOB2 TOLLIP-AS1 BRSK2 MUC2 MUC6 TSPAN4 TOLLIP MUC5AC AP2A2 MIR6744
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss POLR2L CD151 CHID1 TSPAN4 SNORA52 PIDD1 CRACR2B AP2A2 PNPLA2 RPLP2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss PDDC1 CD151 LOC171391 CHID1 CEND1 PIDD1 CRACR2B SLC25A22 PANO1 POLR2L TSPAN4 SNORA52 PNPLA2 RPLP2
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain POLR2L CD151 CHID1 TSPAN4 CRACR2B PNPLA2
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion PDDC1 CD151 LOC171391 CHID1 TALDO1 CEND1 PIDD1 CRACR2B SLC25A22 PANO1 POLR2L TSPAN4 SNORA52 PNPLA2 RPLP2

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