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See other DEAF1 CNV Assays ›
Gene Symbol
DEAF1
Assay Reference Genome
Location

Chr.11:695669 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00709796_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10522

Gene Name:

 DEAF1, transcription factor

Gene Aliases:

 MRD24, NUDR, SPN, ZMYND5

Location:

 Chr.11:644220-695754 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DEAF1 NM_001293634.1 1 86 NP_001280563.1
NM_021008.3 1 86 NP_066288.2
BM696110.1 1 72
HY094363.1 1 86

Target Gene Details

Entrez Gene ID:

 283232

Gene Name:

 transmembrane protein 80

Gene Aliases:

 -

Location:

 Chr.11:695386-705028 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TMEM80 NM_001042463.2 1 79 NP_001035928.2
NM_001276253.1 1 79 NP_001263182.1
NM_001276274.1 1 79 NP_001263203.1
NM_174940.3 1 79 NP_777600.3
XM_006718206.3 1 85 XP_006718269.3
XM_017017600.1 1 284 XP_016873089.1
BC008671.1
BI916171.1 1 54
DR006597.1
HY080028.1 1 80

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PTDSS2 MUC5AC PDDC1 MIR6744 TALDO1 CDHR5 PKP3 SIGIRR DEAF1 PHRF1 LOC101059906 LMNTD2 CEND1 LOC101927503 TMEM80 SCT TOLLIP RNH1 ANO9 CHID1 MUC2 MUC5B MIR210HG CD151 PANO1 LOC171391 TSPAN4 AP2A2 RASSF7 EPS8L2 MUC6 PNPLA2 SLC25A22 RPLP2 HRAS B4GALNT4 LRRC56 CRACR2B MIR210 POLR2L PIDD1 SNORA52 DRD4 IRF7 LOC143666
esv3625074 Chr.11:669311 - 702135 on Build GRCh38 Loss DEAF1 TMEM80
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss PTDSS2 MUC5AC PDDC1 MIR6744 TALDO1 CDHR5 SIGIRR DEAF1 PHRF1 LOC101059906 LMNTD2 CEND1 LOC101927503 TMEM80 SCT TOLLIP RNH1 ANO9 CHID1 MUC2 MUC5B MIR210HG CD151 PANO1 LOC171391 TSPAN4 AP2A2 RASSF7 EPS8L2 MUC6 PNPLA2 SLC25A22 RPLP2 HRAS TOLLIP-AS1 LRRC56 CRACR2B MIR210 POLR2L PIDD1 SNORA52 DRD4 IRF7 LOC143666
nsv832043 Chr.11:631027 - 758602 on Build GRCh38 Loss TALDO1 EPS8L2 DEAF1 TMEM80 DRD4
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PTDSS2 PDDC1 TALDO1 CDHR5 PKP3 SIGIRR DEAF1 PHRF1 LOC101059906 LMNTD2 CEND1 TMEM80 SCT RNH1 ANO9 CHID1 MIR210HG CD151 PANO1 LOC171391 TSPAN4 AP2A2 RASSF7 EPS8L2 PNPLA2 SLC25A22 RPLP2 HRAS B4GALNT4 LRRC56 CRACR2B MIR210 POLR2L PIDD1 SNORA52 DRD4 IRF7 LOC143666
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PTDSS2 PDDC1 TALDO1 CDHR5 DEAF1 PHRF1 LOC101059906 LMNTD2 CEND1 TMEM80 SCT RNH1 CHID1 MIR210HG CD151 PANO1 LOC171391 TSPAN4 RASSF7 EPS8L2 PNPLA2 SLC25A22 RPLP2 HRAS LRRC56 CRACR2B MIR210 POLR2L PIDD1 SNORA52 DRD4 IRF7 LOC143666

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