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See other TRPM4 CNV Assays ›
Gene Symbol
TRPM4
Assay Reference Genome
Location

Chr.19:49166163 on build GRCh38
Cytoband
19q13.33
Assay ID Hs00712392_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 54795

Gene Name:

 transient receptor potential cation channel subfamily M member 4

Gene Aliases:

 LTrpC4, PFHB1B, TRPM4B, hTRPM4

Location:

 Chr.19:49157741-49211841 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 3 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TRPM4 NM_001195227.1 NP_001182156.1
NM_001321281.1 NP_001308210.1
NM_001321282.1 NP_001308211.1
NM_001321283.1 NP_001308212.1
NM_001321285.1 NP_001308214.1
NM_017636.3 NP_060106.2
AF497623.1 AAM18083.1
AJ575813.1 CAE05941.1
AK000048.1 BAA90907.1
AK292862.1
AK295820.1
AK307897.1
AY046396.1 AAL02142.1
AY297044.1 AAP44473.1
AY297045.1 AAP44474.1
AY297046.1 AAP44475.1
BC132727.1
DA218254.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833859 Chr.19:48997009 - 49173266 on Build GRCh38 Loss SNAR-G2 NTF4 CGB8 HRC CGB1 KCNA7 SNRNP70 LIN7B LHB CGB7 TRPM4 MIR6798 CGB2 CGB3 PPFIA3 SNAR-G1 CGB5 RUVBL2 LOC101059948 C19orf73
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss MIR5088 BCL2L12 CYTH2 MIR150 TSKS SPHK2 KCNA7 RPL18 SNAR-A2 SULT2B1 LIN7B SNORD35A ZNF114 CGB7 RPL13A VRK3 FLJ26850 CABP5 EMP3 FAM83E HRC GRWD1 TBC1D17 NUCB1 KCNJ14 LOC101928295 SNAR-A5 IRF3 SNAR-A14 PPP1R15A SNAR-C3 MIR4749 PRMT1 KDELR1 SYNGR4 CGB1 SCAF1 GRIN2D PRR12 SNAR-C1 CARD8 SNAR-A4 LHB MAMSTR DKKL1 TULP2 CD37 MIR6798 SLC6A16 SNORD33 AP2A1 CCDC155 PIH1D1 PLA2G4C-AS1 CGB5 SNAR-A7 SEC1P PLA2G4C FCGRT LOC101059948 RASIP1 NTF4 CGB8 FGF21 SNAR-A11 SNRNP70 PTOV1 ZNF473 FTL PNKP ALDH16A1 SNAR-G1 LOC105447645 PTOV1-AS2 IL4I1 C19orf73 SNAR-A13 FLT3LG FUZ ADM5 RRAS LMTK3 TMEM143 SNAR-A6 NOSIP SPACA4 SNAR-C2 PTOV1-AS1 BSPH1 CGB3 PTH2 SNAR-A1 SLC17A7 SNAR-B2 FUT1 GFY DBP AKT1S1 C19orf68 HSD17B14 FUT2 MED25 BAX MIR6800 LOC105372430 NUCB1-AS1 RCN3 CA11 MIR6799 CARD8-AS1 IZUMO1 SNAR-C4 SIGLEC16 PRRG2 SNAR-A9 SNORD34 MIR4324 TRPM4 BCAT2 NUP62 ATF5 RPS11 LIG1 RUVBL2 SNAR-C5 NTN5 SNORD35B SNAR-A3 SNAR-G2 SNAR-A12 ELSPBP1 DHDH SNAR-D SNAR-A8 GYS1 CPT1C SIGLEC11 SNAR-B1 MIR4751 MIR4750 CGB2 CCDC114 PLEKHA4 PPFIA3 SNAR-A10 LOC100287477 SNORD32A TEAD2
dgv1057e212 Chr.19:49165806 - 49183334 on Build GRCh38 Loss TRPM4
nsv1060108 Chr.19:49118098 - 49183334 on Build GRCh38 Gain TRPM4 HRC PPFIA3 LIN7B C19orf73
esv2760526 Chr.19:49115521 - 49170761 on Build GRCh38 Gain TRPM4 HRC PPFIA3 LIN7B C19orf73
dgv667e214 Chr.19:49130606 - 49174364 on Build GRCh38 Gain TRPM4 HRC PPFIA3

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