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See other LOC101927401 CNV Assays ›
Gene Symbol
LOC101927401
Assay Reference Genome
Location

Chr.1:228361128 on build GRCh38
Cytoband
1q42.13
Assay ID Hs00718186_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927401

Gene Name:

 MAGE-like protein 2

Gene Aliases:

 -

Location:

 Chr.1:228360893-228369935 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927401 XM_011544350.2 XP_011542652.1
XM_011544351.2 XP_011542653.1
XM_011544352.2 XP_011542654.1
XM_017003091.1 XP_016858580.1
XM_017003092.1 XP_016858581.1

Target Gene Details

Entrez Gene ID:

 84033

Gene Name:

 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

Gene Aliases:

 ARHGEF30, UNC89

Location:

 Chr.1:228208013-228381431 on Build GRCh38

Assay Gene Location:

 Within Exon 94
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OBSCN NM_001098623.2 NP_001092093.2
NM_001271223.2 NP_001258152.2
NM_052843.3 81 20310 NP_443075.3
XM_005273287.4 XP_005273344.1
XM_005273291.4 XP_005273348.1
XM_005273298.4 XP_005273355.1
XM_005273307.4 XP_005273364.1
XM_006711822.3 XP_006711885.1
XM_006711823.3 XP_006711886.1
XM_006711827.3 85 21400 XP_006711890.1
XM_006711829.3 84 21124 XP_006711892.1
XM_011544297.2 XP_011542599.1
XM_011544299.2 XP_011542601.1
XM_017002443.1 XP_016857932.1
XM_017002444.1 XP_016857933.1
XM_017002445.1 XP_016857934.1
XM_017002446.1 XP_016857935.1
XM_017002447.1 XP_016857936.1
XM_017002448.1 XP_016857937.1
XM_017002449.1 XP_016857938.1
XM_017002450.1 XP_016857939.1
XM_017002451.1 XP_016857940.1
XM_017002452.1 XP_016857941.1
XM_017002453.1 XP_016857942.1
XM_017002454.1 XP_016857943.1
XM_017002455.1 XP_016857944.1
XM_017002456.1 XP_016857945.1
XM_017002457.1 XP_016857946.1
XM_017002458.1 XP_016857947.1
XM_017002459.1 XP_016857948.1
XM_017002460.1 XP_016857949.1
XM_017002461.1 XP_016857950.1
XM_017002462.1 XP_016857951.1
XM_017002463.1 XP_016857952.1
XM_017002464.1 XP_016857953.1
XM_017002465.1 XP_016857954.1
XM_017002466.1 XP_016857955.1
XM_017002467.1 XP_016857956.1
XM_017002468.1 XP_016857957.1
XM_017002469.1 XP_016857958.1
XM_017002470.1 XP_016857959.1
XM_017002471.1 93 23608 XP_016857960.1
XM_017002472.1 93 23605 XP_016857961.1
XM_017002473.1 XP_016857962.1
AB046776.1 BAB13382.1
AB046859.2 BAB13465.2
AJ002535.1 82 20307 CAC44768.1
AL832357.1 26 4726
AL833724.1 3 1755 CAH56259.1
AM231061.1 CAJ76912.1
DQ400343.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain SNAP47 OBSCN MIR6742 TRIM11 JMJD4 C1orf35 LOC100506571 MIR4666A MIR5008 TRIM17 RNF187 HIST3H2A LOC107985355 MRPL55 C1orf145 LOC101927401 MIR3620 HIST3H2BB IBA57-AS1 IBA57 WNT9A PRSS38 LOC101060022 GJC2 HIST3H3 LOC105373289 GUK1 ARF1 WNT3A
nsv1013500 Chr.1:228271433 - 228713854 on Build GRCh38 Gain RNA5S7 OBSCN MIR6742 RNA5S6 RNA5S3 TRIM11 RNA5S14 MIR4666A RNA5S10 TRIM17 RNF187 RNA5S17 RNA5S13 HIST3H2A RNA5S11 RNA5S9 RNA5S5 LOC101927401 RNA5S15 HIST3H2BB BTNL10 RNA5S8 RNA5S16 RHOU RNA5S12 LOC105373132 RNA5S1 RNA5S4 RNA5S2 DUSP5P1 HIST3H3
nsv517545 Chr.1:228268446 - 228498298 on Build GRCh38 Loss OBSCN MIR6742 LOC101927401 TRIM11 HIST3H2A HIST3H2BB HIST3H3 MIR4666A TRIM17 RNF187
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain OBSCN MIR6742 JMJD4 C1orf35 LOC100506571 RNA5S14 MIR5008 RNA5S17 RNA5S13 HIST3H2A RNA5S11 LOC107985355 RNA5S9 RNA5S5 MIR3620 RNA5S15 BTNL10 RNA5S8 RNA5S16 IBA57 RHOU WNT9A RNA5S12 LOC105373132 RNA5S4 RNA5S2 HIST3H3 GUK1 ARF1 WNT3A RNA5S7 SNAP47 RNA5S6 RNA5S3 TRIM11 MIR4666A RNA5S10 TRIM17 RNF187 MRPL55 C1orf145 LOC101927401 HIST3H2BB IBA57-AS1 RNA5S1 PRSS38 LOC101060022 GJC2 DUSP5P1 LOC105373289
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss C1orf145 OBSCN MIR6742 LOC101927401 TRIM11 HIST3H2BB MIR4666A IBA57-AS1 IBA57 TRIM17 GJC2 HIST3H2A HIST3H3 GUK1
nsv549295 Chr.1:228276547 - 228413937 on Build GRCh38 Loss OBSCN MIR6742 LOC101927401 TRIM11 TRIM17
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss OBSCN MIR6742 TRIM11 C1orf35 LOC100506571 MIR4666A MIR5008 TRIM17 RNF187 HIST3H2A LOC107985355 MRPL55 C1orf145 LOC101927401 MIR3620 HIST3H2BB IBA57-AS1 IBA57 WNT9A LOC101060022 GJC2 HIST3H3 GUK1 ARF1 WNT3A
nsv508697 Chr.1:228352336 - 228434913 on Build GRCh38 Deletion OBSCN MIR6742 LOC101927401 TRIM11 HIST3H3 TRIM17
nsv952140 Chr.1:228331100 - 228380999 on Build GRCh38 Deletion OBSCN LOC101927401

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