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See other LOC101927401 CNV Assays ›
Gene Symbol
LOC101927401
Assay Reference Genome
Location

Chr.1:228361128 on build GRCh38
Cytoband
1q42.13
Assay ID Hs00718186_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927401

Gene Name:

 MAGE-like protein 2

Gene Aliases:

 -

Location:

 Chr.1:228360893-228369935 on Build GRCh38

Assay Gene Location:

 Within Intron 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927401 XM_011544350.2 XP_011542652.1
XM_011544351.2 XP_011542653.1
XM_011544352.2 XP_011542654.1
XM_017003091.1 XP_016858580.1
XM_017003092.1 XP_016858581.1

Target Gene Details

Entrez Gene ID:

 84033

Gene Name:

 obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF

Gene Aliases:

 ARHGEF30, UNC89

Location:

 Chr.1:228208013-228381431 on Build GRCh38

Assay Gene Location:

 Within Exon 94
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
OBSCN NM_001098623.2 NP_001092093.2
NM_001271223.2 NP_001258152.2
NM_052843.3 81 20310 NP_443075.3
XM_005273287.4 XP_005273344.1
XM_005273291.4 XP_005273348.1
XM_005273298.4 XP_005273355.1
XM_005273307.4 XP_005273364.1
XM_006711822.3 XP_006711885.1
XM_006711823.3 XP_006711886.1
XM_006711827.3 85 21400 XP_006711890.1
XM_006711829.3 84 21124 XP_006711892.1
XM_011544297.2 XP_011542599.1
XM_011544299.2 XP_011542601.1
XM_017002443.1 XP_016857932.1
XM_017002444.1 XP_016857933.1
XM_017002445.1 XP_016857934.1
XM_017002446.1 XP_016857935.1
XM_017002447.1 XP_016857936.1
XM_017002448.1 XP_016857937.1
XM_017002449.1 XP_016857938.1
XM_017002450.1 XP_016857939.1
XM_017002451.1 XP_016857940.1
XM_017002452.1 XP_016857941.1
XM_017002453.1 XP_016857942.1
XM_017002454.1 XP_016857943.1
XM_017002455.1 XP_016857944.1
XM_017002456.1 XP_016857945.1
XM_017002457.1 XP_016857946.1
XM_017002458.1 XP_016857947.1
XM_017002459.1 XP_016857948.1
XM_017002460.1 XP_016857949.1
XM_017002461.1 XP_016857950.1
XM_017002462.1 XP_016857951.1
XM_017002463.1 XP_016857952.1
XM_017002464.1 XP_016857953.1
XM_017002465.1 XP_016857954.1
XM_017002466.1 XP_016857955.1
XM_017002467.1 XP_016857956.1
XM_017002468.1 XP_016857957.1
XM_017002469.1 XP_016857958.1
XM_017002470.1 XP_016857959.1
XM_017002471.1 93 23608 XP_016857960.1
XM_017002472.1 93 23605 XP_016857961.1
XM_017002473.1 XP_016857962.1
AB046776.1 BAB13382.1
AB046859.2 BAB13465.2
AJ002535.1 82 20307 CAC44768.1
AL832357.1 26 4726
AL833724.1 3 1755 CAH56259.1
AM231061.1 CAJ76912.1
DQ400343.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv826908 Chr.1:227707685 - 228503399 on Build GRCh38 Gain IBA57 WNT3A OBSCN LOC100506571 MIR6742 HIST3H3 GJC2 JMJD4 MIR3620 WNT9A HIST3H2BB PRSS38 LOC101060022 SNAP47 ARF1 MIR4666A C1orf35 LOC105373289 HIST3H2A IBA57-AS1 TRIM11 LOC101927401 GUK1 RNF187 C1orf145 MRPL55 MIR5008 TRIM17 LOC107985355
esv32853 Chr.1:227692415 - 228670462 on Build GRCh38 Gain IBA57 BTNL10 WNT3A MIR6742 GJC2 JMJD4 RNA5S14 MIR3620 RHOU PRSS38 RNA5S11 RNA5S2 SNAP47 C1orf35 RNA5S1 RNA5S3 RNA5S16 RNA5S10 LOC107985355 RNA5S8 RNA5S15 RNA5S7 RNA5S12 RNA5S5 OBSCN LOC100506571 HIST3H3 WNT9A HIST3H2BB RNA5S6 LOC101060022 RNA5S9 ARF1 MIR4666A RNA5S4 LOC105373289 RNA5S13 HIST3H2A IBA57-AS1 TRIM11 LOC101927401 GUK1 DUSP5P1 RNF187 C1orf145 LOC105373132 MRPL55 MIR5008 TRIM17 RNA5S17
nsv517545 Chr.1:228268446 - 228498298 on Build GRCh38 Loss OBSCN HIST3H2A HIST3H2BB MIR6742 TRIM11 LOC101927401 TRIM17 HIST3H3 RNF187 MIR4666A
nsv1013500 Chr.1:228271433 - 228713854 on Build GRCh38 Gain RNA5S12 BTNL10 RNA5S5 OBSCN MIR6742 HIST3H3 RNA5S14 RHOU HIST3H2BB RNA5S11 RNA5S2 RNA5S6 RNA5S9 MIR4666A RNA5S4 RNA5S13 HIST3H2A TRIM11 LOC101927401 DUSP5P1 RNA5S1 RNA5S3 RNF187 RNA5S16 LOC105373132 RNA5S10 TRIM17 RNA5S8 RNA5S15 RNA5S7 RNA5S17
nsv827019 Chr.1:228126466 - 228463319 on Build GRCh38 Loss IBA57 OBSCN HIST3H2A IBA57-AS1 MIR6742 TRIM11 LOC101927401 GUK1 HIST3H3 GJC2 C1orf145 HIST3H2BB TRIM17 MIR4666A
nsv523935 Chr.1:227850423 - 228494048 on Build GRCh38 Loss IBA57 WNT3A OBSCN LOC100506571 MIR6742 HIST3H3 GJC2 MIR3620 WNT9A HIST3H2BB LOC101060022 ARF1 MIR4666A C1orf35 HIST3H2A IBA57-AS1 TRIM11 LOC101927401 GUK1 RNF187 C1orf145 MRPL55 MIR5008 TRIM17 LOC107985355
dgv840n54 Chr.1:228276547 - 228369087 on Build GRCh38 Loss OBSCN LOC101927401
nsv508697 Chr.1:228352336 - 228434913 on Build GRCh38 Deletion OBSCN MIR6742 TRIM11 LOC101927401 TRIM17 HIST3H3
nsv952140 Chr.1:228331100 - 228380999 on Build GRCh38 Deletion OBSCN LOC101927401

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