Hs00735097_cn

• Gene Symbol: JMJD1C
• Assay Reference Genome Location: Chr.10:63521578 on build GRCh38
• Cytoband: 10q21.3

Target Gene Details

• Entrez Gene ID: 221037
• Gene Name: jumonji domain containing 1C
• Gene Aliases: TRIP-8, TRIP8
• Location: Chr.10:63167221-63522075 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
JMJD1C	NM_001318154.1			NP_001305083.1
	NM_001322258.1			NP_001309187.1
	XM_017015897.1			XP_016871386.1
	XM_017015899.1			XP_016871388.1
	XM_017015901.1			XP_016871390.1
	XM_017015903.1			XP_016871392.1
	BF515122.1
	CB854120.1

Target Gene Details

• Entrez Gene ID: 221035
• Gene Name: receptor accessory protein 3
• Gene Aliases: C10orf74, Yip2b
• Location: Chr.10:63521353-63625123 on Build GRCh38
• Assay Gene Location: Overlaps Exon 1 - Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
REEP3	NM_001001330.2			NP_001001330.1
	XM_011539501.2			XP_011537803.1
	XM_017015896.1			XP_016871385.1
	AK289976.1
	AY562241.1			AAT70686.1
	BC010040.2			AAH10040.1
	BC057832.1			AAH57832.1
	BC068557.1			AAH68557.1
	KJ534927.1
	KJ535017.1
	KJ535031.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv551187	Chr.10:63521221 - 63521923 on Build GRCh38	Loss	JMJD1C REEP3
nsv551184	Chr.10:63501424 - 63719655 on Build GRCh38	Gain	JMJD1C REEP3
esv22964	Chr.10:63521142 - 63522056 on Build GRCh38	Loss	JMJD1C REEP3
nsv1112591	Chr.10:63521140 - 63521940 on Build GRCh38	Deletion	JMJD1C REEP3
dgv1202n54	Chr.10:63521170 - 63521923 on Build GRCh38	Gain	JMJD1C REEP3

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

histone modifying enzyme, membrane traffic protein

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
blood coagulation
histone H3-K9 demethylation
oxidation-reduction process
nuclear envelope organization
mitotic nuclear division
mitotic nuclear envelope reassembly
cell division

Function(s)

protein binding
histone demethylase activity (H3-K9 specific)
metal ion binding
thyroid hormone receptor binding
dioxygenase activity