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See other PLEKHN1 CNV Assays ›
Gene Symbol
PLEKHN1
Assay Reference Genome
Location

Chr.1:966786 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00737042_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84069

Gene Name:

 pleckstrin homology domain containing N1

Gene Aliases:

 -

Location:

 Chr.1:965820-975108 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 2 - Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PLEKHN1 NM_001160184.1 NP_001153656.1
NM_032129.2 NP_115505.2
XM_006710944.3 XP_006711007.2
XM_011542248.2 XP_011540550.2
XM_017002474.1 XP_016857963.1
XM_017002475.1 XP_016857964.1
XM_017002476.1 XP_016857965.1
XM_017002477.1 XP_016857966.1
XM_017002478.1 XP_016857967.1
XM_017002479.1 XP_016857968.1
AL136730.1 CAB66664.1
BC101386.2 AAI01387.1
BC101387.2 AAI01388.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762302 Chr.1:914637 - 1106320 on Build GRCh38 Gain LOC284600 LOC107985728 PLEKHN1 HES4 AGRN C1orf159 ISG15 RNF223 PERM1 NOC2L LOC100288175 LOC100130417 LOC105378948 SAMD11 KLHL17
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss LOC100506504 MTND2P28 TAS1R3 FAM138A ISG15 OR4F5 MORN1 ATAD3A B3GALT6 SKI LOC100133331 LOC148413 TTLL10-AS1 GABRD HES4 AGRN C1orf159 MIR429 UBE2J2 MIR6723 CFAP74 CPTP SCNN1D MIR200A LINC01128 LOC105378591 LOC100132287 MIR200B CALML6 ANKRD65 SSU72 CCNL2 MMP23A LOC100288175 LOC100130417 LOC105378948 LOC105378947 SAMD11 MMP23B LOC102725121 FAM87B MIR6808 MRPL20 AURKAIP1 CDK11B OR4F29 ATAD3C PUSL1 LINC01342 OR4F16 SDF4 LOC100288069 LOC100129534 FAM41C TMEM88B LOC101928626 SLC35E2 MIR6727 MXRA8 KLHL17 TNFRSF4 LOC105378592 DVL1 MIR6726 TMEM52 LOC100287934 TNFRSF18 LINC00115 TTLL10 NOC2L NADK LOC107985729 FAM132A ACAP3 LOC107985728 GNB1 PLEKHN1 CPSF3L LOC729737 SLC35E2B MIB2 WASH7P LOC105378589 MIR6859-2 PRKCZ LOC100134822 LOC102724312 FAAP20 FNDC10 LOC284600 VWA1 LOC105378949 MIR6859-1 RNF223 PERM1 MIR1302-2 ATAD3B LOC107984841 DDX11L1 MTND1P23 TMEM240 CDK11A
nsv950451 Chr.1:899421 - 1094520 on Build GRCh38 Deletion LOC284600 LOC107985728 PLEKHN1 HES4 AGRN C1orf159 ISG15 RNF223 PERM1 NOC2L LOC100288175 LOC100130417 LOC105378948 SAMD11 KLHL17
nsv509035 Chr.1:891406 - 985724 on Build GRCh38 Insertion NOC2L LOC284600 LOC107985728 PLEKHN1 LOC100130417 SAMD11 KLHL17 PERM1
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain LINC01342 MIR200A SDF4 LOC107985728 MIR200B PLEKHN1 ISG15 FAM41C LOC100288175 LOC100130417 LOC105378948 SAMD11 TTLL10-AS1 KLHL17 TNFRSF4 LOC284600 TNFRSF18 HES4 AGRN C1orf159 MIR429 RNF223 PERM1 TTLL10 NOC2L
dgv5n100 Chr.1:585989 - 1114424 on Build GRCh38 Gain OR4F16 LINC01128 LOC107985728 PLEKHN1 MTND2P28 LOC100288069 ISG15 FAM41C LOC101928626 LOC100288175 LOC100130417 LOC100133331 LOC105378948 LOC105378947 SAMD11 KLHL17 FAM87B LOC100287934 LOC284600 HES4 LINC00115 AGRN C1orf159 RNF223 PERM1 NOC2L MIR6723 LOC107984841 MTND1P23
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LINC01342 SDF4 LOC100288069 TAS1R3 ISG15 FAM41C TMEM88B ATAD3A B3GALT6 SLC35E2 MIR6727 MXRA8 LOC148413 TTLL10-AS1 KLHL17 TNFRSF4 DVL1 MIR6726 LOC100287934 TNFRSF18 HES4 LINC00115 AGRN C1orf159 MIR429 UBE2J2 TTLL10 NOC2L NADK LOC107985729 CPTP FAM132A SCNN1D MIR200A ACAP3 LINC01128 LOC107985728 MIR200B PLEKHN1 CPSF3L ANKRD65 SSU72 SLC35E2B CCNL2 MMP23A MIB2 LOC100288175 LOC100130417 LOC105378948 SAMD11 MMP23B FAM87B LOC102724312 FNDC10 MIR6808 LOC284600 VWA1 MRPL20 AURKAIP1 RNF223 PERM1 CDK11B ATAD3B ATAD3C PUSL1 TMEM240 CDK11A
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss LINC01342 MIR200A LINC01128 SDF4 LOC107985728 MIR200B PLEKHN1 ISG15 FAM41C B3GALT6 LOC100288175 LOC100130417 LOC105378948 SAMD11 TTLL10-AS1 KLHL17 TNFRSF4 FAM87B LOC284600 TNFRSF18 HES4 LINC00115 AGRN C1orf159 MIR429 RNF223 PERM1 UBE2J2 TTLL10 NOC2L FAM132A
nsv1013524 Chr.1:939510 - 1161955 on Build GRCh38 Gain LINC01342 PLEKHN1 HES4 AGRN C1orf159 ISG15 RNF223 PERM1 NOC2L LOC100288175 LOC105378948 SAMD11 KLHL17
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain SCNN1D LINC01342 MIR200A ACAP3 SDF4 LOC107985728 MIR200B PLEKHN1 CPSF3L ANKRD65 TAS1R3 ISG15 CCNL2 TMEM88B B3GALT6 LOC100288175 LOC100130417 MIR6727 LOC105378948 MXRA8 SAMD11 LOC148413 TTLL10-AS1 KLHL17 TNFRSF4 DVL1 MIR6726 MIR6808 LOC284600 TNFRSF18 HES4 AGRN C1orf159 MIR429 MRPL20 AURKAIP1 RNF223 PERM1 UBE2J2 TTLL10 NOC2L CPTP PUSL1 FAM132A
nsv544895 Chr.1:917392 - 1054900 on Build GRCh38 Loss NOC2L LOC284600 LOC107985728 PLEKHN1 LOC100130417 HES4 AGRN SAMD11 KLHL17 ISG15 PERM1
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion LINC01342 MIR200A SDF4 MIR200B PLEKHN1 TNFRSF18 HES4 AGRN C1orf159 MIR429 ISG15 RNF223 PERM1 TTLL10 NOC2L LOC100288175 LOC105378948 SAMD11 TTLL10-AS1 KLHL17 TNFRSF4
nsv832980 Chr.1:848279 - 1007037 on Build GRCh38 Gain FAM41C LINC01128 NOC2L LOC284600 LOC107985728 PLEKHN1 LOC100130417 HES4 SAMD11 KLHL17 PERM1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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