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See other ATAT1 CNV Assays ›
Gene Symbol
ATAT1
Assay Reference Genome
Location

Chr.6:30646621 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00737421_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 79969

Gene Name:

 alpha tubulin acetyltransferase 1

Gene Aliases:

 C6orf134, MEC17, Nbla00487, TAT, alpha-TAT, alpha-TAT1

Location:

 Chr.6:30626842-30646823 on Build GRCh38

Assay Gene Location:

 Within Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATAT1 NM_001031722.3 13 1526 NP_001026892.1
NR_033823.2 11 1403
XM_005249415.2 12 1581 XP_005249472.1
XM_011514918.2 5 1924 XP_011513220.1
XM_017011316.1 11 1512 XP_016866805.1
BC025755.1 11 1313 AAH25755.1
BC047303.1 13 1526 AAH47303.1
BM682704.1 1 217

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion ZNRD1ASP OR11A1 GTF2H4 GNL1 FLOT1 NRM OR2H1 LOC105375014 OR2H2 TRIM39-RPP21 SNORD32B HCG8 HCG9 SFTA2 CDSN RPP21 PRR3 OR5V1 ATAT1 MAS1L ZNRD1 VARS2 HCG4B HLA-F IER3 HCG22 HLA-F-AS1 HCG20 TCF19 MICA HLA-E PSORS1C1 GABBR1 TRIM26 DPCR1 MDC1-AS1 LOC554223 TRIM31-AS1 HCG18 TUBB PSORS1C2 TRIM15 MDC1 TRIM31 HLA-K MOG PPP1R18 MIR4640 PPP1R11 LINC01015 HLA-G UBD MIR6891 DDR1 LOC101929006 HLA-C HLA-J C6orf15 OR12D2 RNF39 DHX16 HLA-A LINC00243 IFITM4P TRIM10 HCG4 HLA-L OR10C1 HLA-B TRIM39 ZFP57 MRPS18B HCG27 CCHCR1 OR14J1 MIR877 PPP1R10 ABCF1 POU5F1 MUC21 OR12D3 HLA-H PSORS1C3 MUC22 C6orf136 HCG17 OR2J2 TRIM40
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss MRPS18B FLOT1 NRM PPP1R10 MDC1-AS1 ABCF1 DHX16 TUBB ATAT1 MDC1 C6orf136 IER3 PPP1R18 HCG20
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss GTF2H4 GNL1 FLOT1 NRM DDR1 LOC105375014 HLA-C C6orf15 DHX16 SFTA2 CDSN PRR3 ATAT1 VARS2 LINC00243 IER3 HCG22 HCG20 TCF19 MRPS18B HCG27 HLA-E PSORS1C1 CCHCR1 MIR877 PPP1R10 DPCR1 MDC1-AS1 ABCF1 POU5F1 MUC21 TUBB PSORS1C2 MDC1 PSORS1C3 MUC22 C6orf136 PPP1R18 MIR4640
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion ZNRD1ASP OR11A1 GTF2H4 GNL1 FLOT1 ZNF311 NRM OR2H1 LOC105375014 OR2H2 TRIM39-RPP21 LOC100129636 SNORD32B HCG8 HCG9 SFTA2 CDSN RPP21 PRR3 OR5V1 ATAT1 MAS1L ZNRD1 VARS2 OR2W1 HCG4B HLA-F OR2J3 IER3 HCG22 HLA-F-AS1 HCG20 TCF19 HLA-E PSORS1C1 GABBR1 TRIM26 DPCR1 MDC1-AS1 LOC554223 TRIM31-AS1 HCG18 TUBB PSORS1C2 TRIM15 MDC1 TRIM31 LINC01623 HLA-K MOG PPP1R18 MIR4640 PPP1R11 LINC01015 HLA-G UBD HCG16 DDR1 LOC101929006 HCG14 HLA-J C6orf15 OR12D2 RNF39 DHX16 HLA-A TRIM27 LINC00243 IFITM4P TRIM10 HCG4 HLA-L OR10C1 TRIM39 ZFP57 MRPS18B HCG27 OR2B3 CCHCR1 LINC01556 OR14J1 MIR877 PPP1R10 ABCF1 POU5F1 MUC21 OR12D3 HLA-H LINC00533 PSORS1C3 MUC22 C6orf136 HCG17 OR2J2 TRIM40
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion ZNRD1ASP GTF2H4 GNL1 FLOT1 NRM LOC105375014 TRIM39-RPP21 HCG8 HCG9 SFTA2 CDSN RPP21 PRR3 ATAT1 ZNRD1 VARS2 HCG4B HLA-F IER3 HCG22 HLA-F-AS1 HCG20 TCF19 HLA-E PSORS1C1 TRIM26 DPCR1 MDC1-AS1 LOC554223 TRIM31-AS1 HCG18 TUBB PSORS1C2 TRIM15 MDC1 TRIM31 HLA-K PPP1R18 MIR4640 PPP1R11 HLA-G DDR1 HLA-C HLA-J C6orf15 RNF39 DHX16 HLA-A LINC00243 IFITM4P TRIM10 HCG4 HLA-L TRIM39 MRPS18B HCG27 CCHCR1 MIR877 PPP1R10 ABCF1 POU5F1 MUC21 HLA-H PSORS1C3 MUC22 C6orf136 HCG17 TRIM40
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss ZNRD1ASP GTF2H4 GNL1 FLOT1 NRM LOC105375014 TRIM39-RPP21 HCG8 HCG9 SFTA2 CDSN RPP21 PRR3 ATAT1 ZNRD1 VARS2 HCG4B IER3 HCG22 HCG20 TCF19 HLA-E PSORS1C1 TRIM26 DPCR1 MDC1-AS1 TRIM31-AS1 HCG18 TUBB PSORS1C2 TRIM15 MDC1 TRIM31 HLA-K PPP1R18 MIR4640 PPP1R11 DDR1 HLA-C HLA-J C6orf15 RNF39 DHX16 HLA-A LINC00243 TRIM10 HLA-L TRIM39 MRPS18B HCG27 CCHCR1 MIR877 PPP1R10 ABCF1 POU5F1 MUC21 HLA-H PSORS1C3 MUC22 C6orf136 HCG17 TRIM40
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion GTF2H4 GNL1 FLOT1 NRM DDR1 LOC105375014 HLA-C C6orf15 DHX16 SFTA2 CDSN PRR3 ATAT1 VARS2 LINC00243 IER3 HCG22 HCG20 TCF19 MRPS18B HCG27 HLA-E PSORS1C1 CCHCR1 MIR877 PPP1R10 DPCR1 MDC1-AS1 ABCF1 POU5F1 MUC21 TUBB PSORS1C2 MDC1 PSORS1C3 MUC22 C6orf136 PPP1R18 MIR4640
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion GTF2H4 GNL1 FLOT1 NRM DDR1 LOC105375014 DHX16 SFTA2 PRR3 ATAT1 VARS2 LINC00243 IER3 HCG22 HCG20 MRPS18B MIR877 PPP1R10 DPCR1 MDC1-AS1 ABCF1 MUC21 TUBB MDC1 MUC22 C6orf136 PPP1R18 MIR4640
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication ZNRD1ASP GTF2H4 GNL1 FLOT1 NRM HCG26 LOC105375014 TRIM39-RPP21 HCG8 SFTA2 CDSN RPP21 PRR3 ATAT1 ZNRD1 VARS2 IER3 HCG22 HCG20 TCF19 MICA HLA-E PSORS1C1 TRIM26 DPCR1 MDC1-AS1 TRIM31-AS1 HCG18 TUBB PSORS1C2 TRIM15 MDC1 TRIM31 PPP1R18 MIR4640 PPP1R11 MIR6891 DDR1 HLA-C HLA-J C6orf15 RNF39 DHX16 LINC00243 TRIM10 LOC102725068 HLA-L HLA-B TRIM39 MRPS18B HCG27 CCHCR1 MIR877 PPP1R10 HCP5 ABCF1 POU5F1 MUC21 PSORS1C3 MUC22 C6orf136 HCG17 TRIM40

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