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See other ATAT1 CNV Assays ›
Gene Symbol
ATAT1
Assay Reference Genome
Location

Chr.6:30646621 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00737421_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 79969

Gene Name:

 alpha tubulin acetyltransferase 1

Gene Aliases:

 C6orf134, MEC17, Nbla00487, TAT, alpha-TAT, alpha-TAT1

Location:

 Chr.6:30626842-30646823 on Build GRCh38

Assay Gene Location:

 Within Exon 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATAT1 NM_001031722.3 13 1526 NP_001026892.1
NR_033823.2 11 1403
XM_005249415.2 12 1581 XP_005249472.1
XM_011514918.2 5 1924 XP_011513220.1
XM_017011316.1 11 1512 XP_016866805.1
BC025755.1 11 1313 AAH25755.1
BC047303.1 13 1526 AAH47303.1
BM682704.1 1 217

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss FLOT1 ATAT1 HCG20 IER3 C6orf136 TUBB MDC1-AS1 PPP1R10 NRM DHX16 ABCF1 PPP1R18 MDC1 MRPS18B
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion MUC21 HCG27 TRIM39 TRIM10 ZNRD1ASP MOG ZNRD1 IER3 HLA-L OR2J2 HLA-G PRR3 SFTA2 LOC554223 LINC01015 MIR4640 TCF19 MAS1L TRIM39-RPP21 HCG9 HLA-F OR12D2 POU5F1 HCG18 HLA-H C6orf136 MIR877 TUBB HLA-A OR10C1 MDC1-AS1 OR2H1 PSORS1C1 OR11A1 DPCR1 HLA-J PPP1R18 OR2H2 CDSN MDC1 MICA HCG4 PSORS1C2 MUC22 FLOT1 GNL1 VARS2 HLA-K HLA-B IFITM4P HLA-C OR14J1 RPP21 ZFP57 PPP1R10 HCG8 NRM GTF2H4 ABCF1 RNF39 OR12D3 HLA-E LOC101929006 OR5V1 LOC105375014 HCG4B TRIM31 TRIM15 MRPS18B LINC00243 C6orf15 ATAT1 TRIM40 HCG20 SNORD32B PSORS1C3 GABBR1 HCG17 TRIM26 UBD DHX16 DDR1 MIR6891 TRIM31-AS1 PPP1R11 HCG22 CCHCR1 HLA-F-AS1
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss MUC21 HCG27 PSORS1C2 MUC22 FLOT1 GNL1 VARS2 IER3 HLA-C PPP1R10 PRR3 SFTA2 NRM GTF2H4 ABCF1 HLA-E MIR4640 TCF19 LOC105375014 MRPS18B LINC00243 C6orf15 POU5F1 ATAT1 HCG20 PSORS1C3 C6orf136 MIR877 TUBB MDC1-AS1 PSORS1C1 DHX16 DDR1 DPCR1 PPP1R18 HCG22 CCHCR1 CDSN MDC1
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion MUC21 HCG27 TRIM39 HCG16 TRIM10 ZNRD1ASP MOG ZNRD1 IER3 HLA-L OR2J2 HLA-G LOC100129636 PRR3 SFTA2 LOC554223 ZNF311 LINC01015 MIR4640 TCF19 TRIM27 MAS1L TRIM39-RPP21 HCG9 LINC00533 HLA-F OR12D2 POU5F1 HCG18 HLA-H C6orf136 MIR877 TUBB HLA-A OR10C1 MDC1-AS1 OR2H1 PSORS1C1 OR2W1 OR11A1 DPCR1 HLA-J PPP1R18 OR2H2 CDSN MDC1 OR2J3 HCG4 PSORS1C2 MUC22 FLOT1 GNL1 VARS2 HLA-K IFITM4P OR14J1 LINC01623 RPP21 ZFP57 PPP1R10 HCG8 NRM OR2B3 GTF2H4 ABCF1 RNF39 OR12D3 HLA-E LOC101929006 OR5V1 LOC105375014 HCG4B TRIM31 TRIM15 MRPS18B LINC00243 C6orf15 ATAT1 TRIM40 HCG20 SNORD32B PSORS1C3 GABBR1 HCG17 TRIM26 HCG14 UBD DHX16 DDR1 TRIM31-AS1 LINC01556 PPP1R11 HCG22 CCHCR1 HLA-F-AS1
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion MUC21 HCG27 TRIM39 TRIM10 ZNRD1ASP ZNRD1 IER3 HLA-L HLA-G PRR3 SFTA2 LOC554223 MIR4640 TCF19 TRIM39-RPP21 HCG9 HLA-F POU5F1 HCG18 HLA-H C6orf136 MIR877 TUBB HLA-A MDC1-AS1 PSORS1C1 DPCR1 HLA-J PPP1R18 CDSN MDC1 HCG4 PSORS1C2 MUC22 FLOT1 GNL1 VARS2 HLA-K IFITM4P HLA-C RPP21 PPP1R10 HCG8 NRM GTF2H4 ABCF1 RNF39 HLA-E LOC105375014 HCG4B TRIM31 TRIM15 MRPS18B LINC00243 C6orf15 ATAT1 TRIM40 HCG20 PSORS1C3 HCG17 TRIM26 DHX16 DDR1 TRIM31-AS1 PPP1R11 HCG22 CCHCR1 HLA-F-AS1
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion MUC21 HCG27 PSORS1C2 MUC22 FLOT1 GNL1 VARS2 IER3 HLA-C PPP1R10 PRR3 SFTA2 NRM GTF2H4 ABCF1 HLA-E MIR4640 TCF19 LOC105375014 MRPS18B LINC00243 C6orf15 POU5F1 ATAT1 HCG20 PSORS1C3 C6orf136 MIR877 TUBB MDC1-AS1 PSORS1C1 DHX16 DDR1 DPCR1 PPP1R18 HCG22 CCHCR1 CDSN MDC1
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss MUC21 HCG27 TRIM39 TRIM10 ZNRD1ASP ZNRD1 IER3 HLA-L PRR3 SFTA2 MIR4640 TCF19 TRIM39-RPP21 HCG9 POU5F1 HCG18 HLA-H C6orf136 MIR877 TUBB HLA-A MDC1-AS1 PSORS1C1 DPCR1 HLA-J PPP1R18 CDSN MDC1 PSORS1C2 MUC22 FLOT1 GNL1 VARS2 HLA-K HLA-C RPP21 PPP1R10 HCG8 NRM GTF2H4 ABCF1 RNF39 HLA-E LOC105375014 HCG4B TRIM31 TRIM15 MRPS18B LINC00243 C6orf15 ATAT1 TRIM40 HCG20 PSORS1C3 HCG17 TRIM26 DHX16 DDR1 TRIM31-AS1 PPP1R11 HCG22 CCHCR1
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion MUC21 MUC22 FLOT1 GNL1 VARS2 IER3 PPP1R10 PRR3 SFTA2 NRM GTF2H4 ABCF1 MIR4640 LOC105375014 MRPS18B LINC00243 ATAT1 HCG20 C6orf136 MIR877 TUBB MDC1-AS1 DHX16 DDR1 DPCR1 PPP1R18 HCG22 MDC1
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication MUC21 HCG27 TRIM39 TRIM10 ZNRD1ASP ZNRD1 IER3 HLA-L PRR3 SFTA2 MIR4640 TCF19 HCP5 TRIM39-RPP21 POU5F1 HCG18 HCG26 C6orf136 MIR877 TUBB MDC1-AS1 PSORS1C1 DPCR1 HLA-J PPP1R18 CDSN MDC1 MICA PSORS1C2 MUC22 FLOT1 GNL1 VARS2 HLA-B HLA-C RPP21 PPP1R10 HCG8 NRM GTF2H4 ABCF1 RNF39 HLA-E LOC102725068 LOC105375014 TRIM31 TRIM15 MRPS18B LINC00243 C6orf15 ATAT1 TRIM40 HCG20 PSORS1C3 HCG17 TRIM26 DHX16 DDR1 MIR6891 TRIM31-AS1 PPP1R11 HCG22 CCHCR1

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