Hs00756695_cn

• Gene Symbol: ATRIP
• Assay Reference Genome Location: Chr.3:48465570 on build GRCh38
• Cytoband: 3p21.31

Target Gene Details

• Entrez Gene ID: 84126
• Gene Name: ATR interacting protein
• Gene Aliases: -
• Location: Chr.3:48446710-48465655 on Build GRCh38
• Assay Gene Location: Within Exon 15

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ATRIP	NM_001271022.1	14	2318	NP_001257951.1
	NM_001271023.1	13	2575	NP_001257952.1
	NM_032166.3	12	2447	NP_115542.2
	NM_130384.2	13	2528	NP_569055.1
	AF451323.1	13	2424	AAL38042.1
	AK022405.1	11	2041	BAB14029.1
	AK291568.1	11	1994
	AK291829.1	12	2378
	AK300548.1	14	2291
	AK315075.1
	AL832917.1	11	1993	CAH10621.1
	BC014153.2	12	2362	AAH14153.2
	BC020563.2	12	2370	AAH20563.1
	BC030597.2	13	2575	AAH30597.1

Target Gene Details

• Entrez Gene ID: 11277
• Gene Name: three prime repair exonuclease 1
• Gene Aliases: AGS1, CRV, DRN3, HERNS
• Location: Chr.3:48465520-48467645 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TREX1	NM_007248.3	1	51	NP_009179.2
	NM_016381.5	1	51	NP_057465.1
	NM_033629.4	1	51	NP_338599.1
	AL137745.1	1	51

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv834684	Chr.3:48344209 - 48551890 on Build GRCh38	Gain	CCDC51 FBXW12 SHISA5 MIR6823 ATRIP TREX1 PFKFB4 PLXNB1 TMA7
dgv8315n54	Chr.3:48464432 - 48478412 on Build GRCh38	Loss	SHISA5 ATRIP TREX1
nsv590242	Chr.3:48392157 - 48518906 on Build GRCh38	Loss	CCDC51 FBXW12 SHISA5 ATRIP TREX1 PFKFB4 PLXNB1 TMA7
nsv508917	Chr.3:48400224 - 48499357 on Build GRCh38	Insertion	CCDC51 SHISA5 ATRIP TREX1 PLXNB1 TMA7

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

DNA damage checkpoint
DNA replication
interstrand cross-link repair
regulation of signal transduction by p53 class mediator

Function(s)

protein binding
K63-linked polyubiquitin binding