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See other EME2 CNV Assays ›
Gene Symbol
EME2
Assay Reference Genome
Location

Chr.16:1775620 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00779727_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 197342

Gene Name:

 essential meiotic structure-specific endonuclease subunit 2

Gene Aliases:

 SLX2B, gs125

Location:

 Chr.16:1773222-1776714 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EME2 NM_001257370.1 6 715 NP_001244299.1
XM_017023025.1 6 637 XP_016878514.1
XM_017023026.1 5 628 XP_016878515.1
AK074080.2 5 799 BAB84906.2
EF452422.1 6 715

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv457335 Chr.16:1729694 - 1789022 on Build GRCh38 Loss MAPK8IP3 MIR3177 NME3 EME2 SPSB3 MRPS34 NUBP2
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication SYNGR3 LINC00254 TSC2 LOC105371184 MRPL28 SNORA64 AMDHD2 EME2 NTHL1 TPSAB1 TPSG1 RHBDL1 MIR3176 MIR6859-4 POLR3K PDPK1 RPUSD1 TMEM8A SNHG19 NDUFB10 SOX8 HBA2 CCDC78 MRPS34 HBQ1 LUC7L ZNF598 LOC729652 TMEM204 ECI1 DDX11L10 MCRIP2 WDR90 MIR1225 MIR3677 UBE2I WFIKKN1 CLCN7 GNG13 SNORA10 SLC9A3R2 MEIOB RPL23AP5 RNPS1 FLJ42627 LOC107987233 MIR3178 CAPN15 RAB26 TRAF7 MIR4717 RAB40C PTX4 AXIN1 NTN3 CCDC154 SSTR5 LOC105371045 IFT140 C1QTNF8 CHTF18 HS3ST6 NHLRC4 LOC652276 METRN MSRB1 BRICD5 RHOT2 MIR940 MIR5587 MIR3180-5 SNHG9 METTL26 JMJD8 RPL3L LOC107984876 PDIA2 ABCA17P TPSD1 SPSB3 NOXO1 PRSS27 ATP6V0C SNORA78 DNASE1L2 GFER FAHD1 RAB11FIP3 CEMP1 CRAMP1 LMF1 MIR4516 PRSS29P LOC100287175 TBL3 NME4 HAGHL NARFL LOC101929280 MIR6768 WASIR2 DECR2 LOC105371047 ABCA3 HBA1 PRR25 RPS2 LOC106660606 IGFALS MIR6767 C16orf91 TSR3 PRR35 NUBP2 TPSB2 GNPTG LOC105371038 LOC100134368 HBZ NME3 ERVK13-1 HAGH LMF1-AS1 CASKIN1 MIR6511B1 MAPK8IP3 PKD1 NPW SNRNP25 RGS11 LOC105371046 TBC1D24 RNF151 C16orf59 FBXL16 SSTR5-AS1 PIGQ FAM173A PGP MLST8 MIR662 HBM FAM234A WDR24 ARHGDIG CCNF RHBDF1 LINC00235 HN1L TELO2 KCTD5 MSLN MIR3177 MPG E4F1 BAIAP3 CACNA1H SNORD60 STUB1 UNKL NPRL3 LOC105371049
esv3892756 Chr.16:1764390 - 1780436 on Build GRCh38 Loss MAPK8IP3 NME3 EME2 SPSB3 MRPS34
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion MAPK8IP3 MIR3177 NME3 EME2 IGFALS SPSB3 MRPS34 NUBP2
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss MAPK8IP3 NME3 EME2 IGFALS SPSB3 MRPS34 NUBP2
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss MAPK8IP3 EME2 IGFALS CRAMP1 HN1L NUBP2 LOC105371046 MIR3177 NME3 HAGH IFT140 SPSB3 MRPS34
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss MAPK8IP3 NME3 EME2 IGFALS SPSB3 MRPS34 NUBP2
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss MAPK8IP3 FAHD1 TMEM204 EME2 IGFALS CRAMP1 HN1L NUBP2 TELO2 LOC105371046 MIR3177 NME3 HAGH MEIOB IFT140 SPSB3 MRPS34 LOC105371047
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain MAPK8IP3 NME3 EME2 IGFALS SPSB3 MRPS34 NUBP2
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss MAPK8IP3 FAHD1 EME2 IGFALS CRAMP1 HN1L NUBP2 MIR3177 NME3 HAGH MEIOB SPSB3 MRPS34
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss MAPK8IP3 NME3 EME2 SPSB3 MRPS34
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion MAPK8IP3 MIR3177 FAHD1 NME3 EME2 IGFALS HAGH SPSB3 MRPS34 NUBP2
nsv571170 Chr.16:1752231 - 1791032 on Build GRCh38 Loss MAPK8IP3 NME3 EME2 IGFALS SPSB3 MRPS34 NUBP2

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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