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See other TNFRSF18 CNV Assays ›
Gene Symbol
TNFRSF18
Assay Reference Genome
Location

Chr.1:1206396 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00812732_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 8784

Gene Name:

 TNF receptor superfamily member 18

Gene Aliases:

 AITR, CD357, GITR, GITR-D

Location:

 Chr.1:1203508-1207900 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TNFRSF18 NM_004195.2 NP_004186.1
NM_148901.1 NP_683699.1
NM_148902.1 NP_683700.1
XM_017002722.1 XP_016858211.1
AF117297.1 AAD19694.1
AF125304.1 AAD22635.1
AF241229.1 AAF63506.1
AY358877.1 AAQ89236.1
BC152381.1
BC152386.1
BE244247.1
BT019531.1 AAV38338.1
BT019532.1 AAV38339.1
KP067911.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIB2 TTLL10-AS1 LOC107985728 MIR6859-2 LOC102724312 LOC105378948 LOC148413 FAM41C LOC100130417 PRKCZ CDK11A LOC100287934 PLEKHN1 CCNL2 DVL1 LOC100134822 CFAP74 ATAD3A LOC100133331 NADK CPTP LOC100132287 LOC101928626 TNFRSF18 MIR6726 LOC105378592 LOC102725121 FNDC10 FAM132A LOC100288069 AGRN SKI PERM1 MTND2P28 LOC100129534 MXRA8 ANKRD65 CDK11B CPSF3L MIR429 VWA1 MIR200A FAM87B MIR6859-1 AURKAIP1 SLC35E2B C1orf159 TAS1R3 TMEM52 UBE2J2 LINC01128 GABRD FAM138A SDF4 GNB1 B3GALT6 MIR6727 LOC729737 LOC107985729 LOC105378589 NOC2L OR4F5 WASH7P CALML6 LOC107984841 ATAD3B MORN1 TMEM88B MIR200B LOC100506504 RNF223 LOC105378947 TTLL10 MMP23A SAMD11 LINC00115 LOC100288175 LOC284600 ISG15 LOC105378949 SSU72 OR4F16 TNFRSF4 KLHL17 MIR1302-2 MIR6723 MMP23B OR4F29 LOC105378591 ACAP3 MTND1P23 PUSL1 FAAP20 TMEM240 MRPL20 HES4 SCNN1D DDX11L1 MIR6808 SLC35E2 LINC01342 ATAD3C
nsv1003578 Chr.1:1068249 - 1282706 on Build GRCh38 Gain TNFRSF4 TTLL10-AS1 C1orf159 TNFRSF18 UBE2J2 MIR429 SCNN1D MIR200B FAM132A RNF223 SDF4 LOC105378948 B3GALT6 LINC01342 MIR200A TTLL10
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss TNFRSF4 TTLL10-AS1 C1orf159 TNFRSF18 MIR6726 UBE2J2 ACAP3 MIR429 SCNN1D MIR200B FAM132A RNF223 SDF4 B3GALT6 LINC01342 MIR200A TTLL10
nsv544960 Chr.1:1204036 - 1207482 on Build GRCh38 Loss TNFRSF18
nsv544956 Chr.1:1171093 - 1241217 on Build GRCh38 Loss TNFRSF4 TTLL10-AS1 SDF4 B3GALT6 TNFRSF18 TTLL10
nsv428334 Chr.1:874371 - 1220569 on Build GRCh38 Gain TTLL10-AS1 SAMD11 C1orf159 TNFRSF18 LOC100288175 LOC107985728 LOC284600 ISG15 SDF4 LOC105378948 FAM41C LOC100130417 AGRN PERM1 TNFRSF4 KLHL17 PLEKHN1 NOC2L MIR429 HES4 MIR200B RNF223 LINC01342 MIR200A TTLL10
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication TTLL10-AS1 C1orf159 TNFRSF18 TAS1R3 MIR6726 UBE2J2 LOC100288175 FAM132A SDF4 LOC105378948 B3GALT6 AGRN MIR6727 TNFRSF4 CPSF3L ACAP3 MIR429 PUSL1 SCNN1D MIR200B RNF223 LINC01342 MIR200A TTLL10 CPTP
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MIB2 TTLL10-AS1 FAM87B AURKAIP1 SLC35E2B C1orf159 TAS1R3 UBE2J2 LOC107985728 LINC01128 SDF4 LOC102724312 LOC105378948 B3GALT6 LOC148413 FAM41C LOC100130417 MIR6727 CDK11A LOC100287934 PLEKHN1 LOC107985729 CCNL2 DVL1 NOC2L ATAD3B TMEM88B MIR200B RNF223 ATAD3A TTLL10 NADK CPTP MMP23A SAMD11 TNFRSF18 LINC00115 MIR6726 LOC100288175 LOC284600 FNDC10 FAM132A ISG15 LOC100288069 SSU72 AGRN PERM1 TNFRSF4 MXRA8 KLHL17 ANKRD65 MMP23B CDK11B CPSF3L ACAP3 MIR429 PUSL1 TMEM240 MRPL20 HES4 VWA1 SCNN1D MIR6808 SLC35E2 LINC01342 MIR200A ATAD3C
nsv517709 Chr.1:817186 - 1275912 on Build GRCh38 Gain+Loss TTLL10-AS1 FAM87B SAMD11 C1orf159 TNFRSF18 LINC00115 UBE2J2 LOC100288175 LOC107985728 LOC284600 LINC01128 FAM132A ISG15 SDF4 LOC105378948 B3GALT6 FAM41C LOC100130417 AGRN PERM1 TNFRSF4 KLHL17 PLEKHN1 NOC2L MIR429 HES4 MIR200B RNF223 LINC01342 MIR200A TTLL10
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MIB2 TTLL10-AS1 AURKAIP1 C1orf159 TNFRSF18 TAS1R3 MIR6726 UBE2J2 FNDC10 FAM132A SDF4 LOC102724312 B3GALT6 LOC148413 SSU72 MIR6727 TNFRSF4 MXRA8 ANKRD65 LOC107985729 MMP23B CCNL2 DVL1 CDK11B CPSF3L ACAP3 MIR429 PUSL1 TMEM240 ATAD3B MRPL20 VWA1 SCNN1D TMEM88B MIR200B MIR6808 ATAD3A LINC01342 MIR200A ATAD3C TTLL10 CPTP
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain TTLL10-AS1 SAMD11 AURKAIP1 C1orf159 TNFRSF18 TAS1R3 MIR6726 UBE2J2 LOC100288175 LOC107985728 LOC284600 FAM132A ISG15 SDF4 LOC105378948 B3GALT6 LOC148413 LOC100130417 AGRN MIR6727 PERM1 TNFRSF4 MXRA8 KLHL17 ANKRD65 PLEKHN1 CCNL2 DVL1 NOC2L CPSF3L ACAP3 MIR429 PUSL1 MRPL20 HES4 SCNN1D TMEM88B MIR200B RNF223 MIR6808 LINC01342 MIR200A TTLL10 CPTP
nsv1160644 Chr.1:939652 - 1220663 on Build GRCh38 Deletion TNFRSF4 TTLL10-AS1 KLHL17 SAMD11 PLEKHN1 C1orf159 TNFRSF18 NOC2L MIR429 LOC100288175 HES4 MIR200B ISG15 RNF223 SDF4 LOC105378948 LINC01342 AGRN MIR200A TTLL10 PERM1
dgv24n54 Chr.1:1205055 - 1213515 on Build GRCh38 Loss TNFRSF4 TNFRSF18
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain TNFRSF4 TTLL10-AS1 TNFRSF18 MIR6726 CPSF3L UBE2J2 ACAP3 MIR429 PUSL1 SCNN1D MIR200B FAM132A SDF4 B3GALT6 MIR200A MIR6727 TTLL10

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