Hs00817787_cn

• Gene Symbol: CDH17
• Assay Reference Genome Location: Chr.8:94127359 on build GRCh38
• Cytoband: 8q22.1

Target Gene Details

• Entrez Gene ID: 1015
• Gene Name: cadherin 17
• Gene Aliases: CDH16, HPT-1, HPT1
• Location: Chr.8:94127162-94217303 on Build GRCh38
• Assay Gene Location: Within Exon 19

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CDH17	NM_001144663.1	18	3506	NP_001138135.1
	NM_004063.3	18	3505	NP_004054.3
	XM_011516790.1	17	3264	XP_011515092.1
	AI566493.1	1	198
	AK130441.1	2	1107
	BF591263.1	1	199
	X83228.1	18	3472	CAA58231.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1022473	Chr.8:91854892 - 94250166 on Build GRCh38	Loss	RBM12B TMEM67 LOC105375640 FLJ46284 LINC00535 PDP1 RUNX1T1 FAM92A1 RBM12B-AS1 MIR378D2 C8orf87 MIR8084 CDH17 LOC102724710 TRIQK GEM

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Process(es)

germinal center B cell differentiation
marginal zone B cell differentiation
transport
oligopeptide transport
cell adhesion
homophilic cell adhesion via plasma membrane adhesion molecules
integrin-mediated signaling pathway
calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules
positive regulation of integrin activation by cell surface receptor linked signal transduction
adherens junction organization
oligopeptide transmembrane transport
spleen development

Function(s)

integrin binding
transporter activity
proton-dependent oligopeptide secondary active transmembrane transporter activity
calcium ion binding