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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1302982 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00818252_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 NP_085152.2
XM_005244715.2 XP_005244772.1
XM_011540606.2 XP_011538908.1
XM_011540607.1 XP_011538909.1
XM_011540608.2 XP_011538910.1
XM_011540609.2 XP_011538911.1
XM_017000233.1 XP_016855722.1
AB051503.1 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
AK098490.1
BC051194.1 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss MIR6726 ACAP3 UBE2J2 SCNN1D
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss MIR6726 ACAP3 FAM132A UBE2J2 SDF4 SCNN1D B3GALT6
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss ATAD3C MXRA8 LINC01128 OR4F16 CPTP NOC2L ATAD3A FAM138A FAM87B DDX11L1 SDF4 CALML6 TMEM240 LOC107985728 AGRN ISG15 GNB1 MIR200A HES4 LOC100288175 SAMD11 CFAP74 NADK MORN1 OR4F5 LOC105378947 LOC148413 PLEKHN1 LOC101928626 MIR6726 CCNL2 FAM132A CPSF3L MIR429 MIR200B MIR6727 MMP23B UBE2J2 TAS1R3 SLC35E2B LOC729737 LOC102725121 MIR6859-1 FAM41C FAAP20 MRPL20 B3GALT6 OR4F29 ANKRD65 WASH7P PERM1 MIR1302-2 VWA1 LOC105378592 MIR6808 SSU72 MIR6859-2 LOC100134822 ACAP3 LOC100132287 LOC107985729 LOC100506504 LOC105378948 MIB2 LINC01342 TMEM52 LOC100133331 DVL1 TTLL10 LOC102724312 MTND1P23 ATAD3B LOC100288069 LOC105378591 TMEM88B LINC00115 AURKAIP1 LOC100130417 LOC100287934 TNFRSF18 CDK11B LOC107984841 SCNN1D TTLL10-AS1 KLHL17 LOC100129534 MIR6723 SLC35E2 PRKCZ LOC105378949 GABRD FNDC10 TNFRSF4 LOC284600 SKI PUSL1 MMP23A LOC105378589 RNF223 C1orf159 MTND2P28 CDK11A
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss MIR6727 MIR6726 ACAP3 DVL1 PUSL1 MIR6808 TAS1R3 CPSF3L CPTP
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss MIR6727 MIR6726 ACAP3 DVL1 PUSL1 MIR6808 TAS1R3 AURKAIP1 CPSF3L MXRA8 SCNN1D CPTP
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss MIR6726 ACAP3 FAM132A AURKAIP1 CPSF3L MXRA8 MIR429 CPTP MIR200B MIR6727 UBE2J2 TNFRSF18 SDF4 TAS1R3 SCNN1D TTLL10-AS1 LINC01342 MIR200A B3GALT6 DVL1 TNFRSF4 TTLL10 PUSL1 MIR6808 RNF223 C1orf159
dgv6n100 Chr.1:1301750 - 1362354 on Build GRCh38 Gain+Loss MIR6727 ACAP3 DVL1 PUSL1 MIR6808 TAS1R3 CPSF3L MXRA8 CPTP
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion MIR6727 MIR6726 ACAP3 DVL1 PUSL1 MIR6808 TAS1R3 AURKAIP1 CPSF3L MXRA8 SCNN1D CPTP
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication MIR6726 ACAP3 FAM132A CPSF3L MIR429 CPTP MIR200B MIR6727 UBE2J2 TNFRSF18 SDF4 TAS1R3 SCNN1D LOC105378948 TTLL10-AS1 AGRN LINC01342 MIR200A LOC100288175 B3GALT6 TNFRSF4 TTLL10 PUSL1 RNF223 C1orf159
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss ACAP3 ATAD3C LOC107985729 MXRA8 LINC01128 CPTP NOC2L ATAD3A FAM87B SDF4 TMEM240 LOC107985728 LOC105378948 AGRN MIB2 ISG15 LINC01342 MIR200A HES4 LOC100288175 SAMD11 NADK DVL1 TTLL10 LOC148413 LOC102724312 PLEKHN1 ATAD3B MIR6726 CCNL2 FAM132A LOC100288069 TMEM88B LINC00115 AURKAIP1 CPSF3L MIR429 MIR200B LOC100130417 MIR6727 LOC100287934 MMP23B UBE2J2 TNFRSF18 CDK11B TAS1R3 SCNN1D SLC35E2B TTLL10-AS1 KLHL17 FAM41C SLC35E2 MRPL20 B3GALT6 FNDC10 TNFRSF4 LOC284600 ANKRD65 PERM1 PUSL1 VWA1 MMP23A MIR6808 SSU72 RNF223 C1orf159 CDK11A
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain MIR6727 MIR6726 ACAP3 DVL1 PUSL1 MIR6808 TAS1R3 CPSF3L MXRA8 SCNN1D CPTP
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MIR6726 ACAP3 CCNL2 FAM132A ATAD3C TMEM88B LOC107985729 AURKAIP1 CPSF3L MXRA8 MIR429 CPTP MIR200B ATAD3A MIR6727 MMP23B UBE2J2 TNFRSF18 CDK11B SDF4 TMEM240 TAS1R3 SCNN1D TTLL10-AS1 MIB2 LINC01342 MIR200A MRPL20 B3GALT6 DVL1 FNDC10 TNFRSF4 TTLL10 ANKRD65 LOC148413 PUSL1 VWA1 LOC102724312 MIR6808 SSU72 C1orf159 ATAD3B
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss MIR6726 ACAP3 AURKAIP1 CPSF3L MXRA8 CPTP MIR6727 DVL1 UBE2J2 PUSL1 MIR6808 TAS1R3 SCNN1D
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MIR6726 ACAP3 CCNL2 FAM132A TMEM88B AURKAIP1 CPSF3L MXRA8 MIR429 CPTP MIR200B NOC2L LOC100130417 MIR6727 UBE2J2 TNFRSF18 SDF4 LOC107985728 TAS1R3 SCNN1D LOC105378948 TTLL10-AS1 AGRN KLHL17 ISG15 LINC01342 MIR200A HES4 LOC100288175 SAMD11 MRPL20 B3GALT6 DVL1 TNFRSF4 LOC284600 TTLL10 ANKRD65 PERM1 LOC148413 PUSL1 MIR6808 RNF223 PLEKHN1 C1orf159
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR6726 ACAP3 FAM132A MIR200A CPSF3L MIR429 MIR200B B3GALT6 MIR6727 TNFRSF4 TTLL10 UBE2J2 TNFRSF18 PUSL1 SDF4 SCNN1D TTLL10-AS1

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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