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See other AGPAT5 CNV Assays ›
Gene Symbol
AGPAT5
Assay Reference Genome
Location

Chr.8:6730767 on build GRCh38
Cytoband
8p23.1
Assay ID Hs00820149_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 55326

Gene Name:

 1-acylglycerol-3-phosphate O-acyltransferase 5

Gene Aliases:

 1AGPAT5, LPAATE

Location:

 Chr.8:6708357-6761503 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AGPAT5 NM_018361.3 3 658 NP_060831.2
XM_011534751.2 3 428 XP_011533053.1
AF375789.1 3 620 AAK54809.1
AK002072.1 3 322 BAA92069.1
AK310545.1
AL136587.1 3 348 CAB66522.1
BC023550.2 3 602 AAH23550.1
BC068519.1 3 322 AAH68519.1
BC080537.1 3 627 AAH80537.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1021684 Chr.8:6492570 - 6951933 on Build GRCh38 Loss AGPAT5 ANGPT2 XKR5 MIR4659A MCPH1 DEFA4 DEFA8P DEFB1 MIR4659B DEFA6 GS1-24F4.2 MCPH1-AS1 MIR8055
esv7258 Chr.8:6730063 - 6730876 on Build GRCh38 Loss AGPAT5
nsv610004 Chr.8:6544845 - 6915391 on Build GRCh38 Gain DEFB1 MIR4659B GS1-24F4.2 AGPAT5 MCPH1-AS1 MIR8055 ANGPT2 XKR5 MIR4659A MCPH1
nsv1025976 Chr.8:6615427 - 6829450 on Build GRCh38 Loss MIR4659B AGPAT5 MCPH1-AS1 MIR8055 XKR5 MIR4659A MCPH1
esv2145090 Chr.8:6730129 - 6730832 on Build GRCh38 Deletion AGPAT5
esv2422383 Chr.8:6504868 - 6924071 on Build GRCh38 Duplication DEFB1 MIR4659B GS1-24F4.2 AGPAT5 MCPH1-AS1 MIR8055 ANGPT2 XKR5 MIR4659A MCPH1
nsv831220 Chr.8:6670324 - 6870969 on Build GRCh38 Gain DEFB1 MIR4659B GS1-24F4.2 AGPAT5 MCPH1-AS1 XKR5 MIR4659A
nsv610006 Chr.8:6710680 - 7063882 on Build GRCh38 Gain DEFA7P DEFA9P AGPAT5 DEFT1P DEFA10P DEFT1P2 DEFA1B XKR5 MIR4659A DEFA4 DEFA1 DEFA8P DEFB1 MIR4659B DEFA11P DEFA3 DEFA5 DEFA6 GS1-24F4.2
nsv1031577 Chr.8:6712833 - 8008628 on Build GRCh38 Gain DEFB106A DEFB103A OR7E125P AGPAT5 DEFB4A DEFT1P DEFA10P DEFB105A ZNF705B DEFA1B LINC00965 MIR4659A FAM66B DEFA4 DEFA1 MIR4659B DEFA5 SPAG11A LOC101928095 DEFB104B USP17L1 DEFB103B USP17L4 DEFB108P1 OR7E154P DEFB107A DEFB109P1B DEFB105B DEFB107B GS1-24F4.2 SPAG11B DEFA7P FAM66E LOC107986910 PRR23D1 DEFT1P2 DEFB4B FAM90A7P DEFB1 DEFA11P DEFA3 FAM90A10P DEFA9P PRR23D2 USP17L3 DEFB104A LOC101929400 USP17L8 ZNF705G DEFB106B XKR5 DEFA8P DEFA6
esv2546871 Chr.8:6729668 - 6731302 on Build GRCh38 Deletion AGPAT5
dgv6876n100 Chr.8:6687977 - 6812428 on Build GRCh38 Loss MIR4659B AGPAT5 MCPH1-AS1 XKR5 MIR4659A

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