Name: [Hs00832960_cn] [HCN3]
Creator: Thermo Fisher Scientific
Keywords: [HCN3] Assay, [hyperpolarization activated cyclic nucleotide gated potassium channel 3] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	57657
Gene Name:	hyperpolarization activated cyclic nucleotide gated potassium channel 3
Gene Aliases:	-
Location:	Chr.1:155277427-155289848 on Build GRCh38
Assay Gene Location:	Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HCN3	NM_020897.2	8	3052	NP_065948.1
	XM_011509816.2	8	3570	XP_011508118.1
	XM_011509817.2	7	2890	XP_011508119.1
	XM_011509818.2	7	2282	XP_011508120.1
	XM_017001918.1	7	2264	XP_016857407.1
	AB040968.2	8	2701	BAA96059.2
	AK055840.1
	BC000066.1	7	2280	AAH00066.1
	BC028024.1	5	1917	AAH28024.2

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv3032	Chr.1:155285619 - 155318185 on Build GRCh38	Insertion	PKLR FDPS LOC105371451 HCN3
nsv831636	Chr.1:155249432 - 155475073 on Build GRCh38	Loss	PKLR RUSC1-AS1 SCAMP3 POU5F1P4 FDPS FAM189B RUSC1 ASH1L LOC105371451 CLK2 HCN3 MIR555
esv33869	Chr.1:155253492 - 155948170 on Build GRCh38	Loss	ASH1L-AS1 RXFP4 RUSC1 YY1AP1 ASH1L KIAA0907 CLK2 SCARNA26B SNORA80E MIR555 PKLR SCARNA26A SCAMP3 FDPS MSTO1 DAP3 SYT11 HCN3 POU5F1P4 RIT1 FAM189B GON4L MSTO2P RUSC1-AS1 LOC100505728 LOC105371451 ARHGEF2 SCARNA4
nsv436027	Chr.1:155260761 - 155291532 on Build GRCh38	Insertion	PKLR SCAMP3 CLK2 HCN3
nsv952214	Chr.1:155279610 - 155304509 on Build GRCh38	Deletion	PKLR HCN3
esv2758971	Chr.1:155122502 - 155345016 on Build GRCh38	Gain	MUC1 FAM189B RUSC1 ASH1L DPM3 CLK2 PKLR MTX1 THBS3 RUSC1-AS1 SCAMP3 SLC50A1 MIR92B TRIM46 GBA EFNA1 FDPS GBAP1 LOC105371451 HCN3 KRTCAP2
esv23319	Chr.1:155257268 - 155292883 on Build GRCh38	Gain	PKLR SCAMP3 CLK2 HCN3