Hs00833350_cn

• Gene Symbol: STK19
• Assay Reference Genome Location: Chr.6:31972771 on build GRCh38
• Cytoband: 6p21.33

Target Gene Details

• Entrez Gene ID: 8859
• Gene Name: serine/threonine kinase 19
• Gene Aliases: D6S60, D6S60E, G11, HLA-RP1, RP1
• Location: Chr.6:31971175-31981446 on Build GRCh38
• Assay Gene Location: Overlaps Exon 3 - Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
STK19	NM_004197.1			NP_004188.1
	NM_032454.1			NP_115830.1
	NR_026717.1
	AK302111.1
	AK303438.1	3	747
	AK307198.1
	BC110347.1			AAI10348.1
	BC121128.1
	BC121129.1
	BC143833.1
	L26260.1			AAA20122.1
	X77386.1			CAA54565.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv601970	Chr.6:31970674 - 31980252 on Build GRCh38	Loss	DXO STK19
dgv10463n54	Chr.6:31817661 - 32683279 on Build GRCh38	Loss	HLA-DQB1-AS1 SKIV2L ATF6B TNXA BTNL2 MIR1236 AGPAT1 LOC100507547 TNXB STK19 NOTCH4 SLC44A4 HLA-DQB1 PBX2 CFB NEU1 FKBPL DXO GPSM3 C2-AS1 LOC101929163 PRRT1 HLA-DRB6 C6orf10 HSPA1A EGFL8 CYP21A2 ZBTB12 SNORD52 C2 HLA-DRB1 HLA-DRA HSPA1B C4B C4A RNF5 CYP21A1P HCG23 HLA-DRB5 AGER C6orf48 PPT2-EGFL8 HLA-DQA1 PPT2 SNORD48 MIR6833 NELFE MIR6721 EHMT2
nsv601971	Chr.6:31971488 - 32046679 on Build GRCh38	Gain	CYP21A2 C4B C4A CYP21A1P DXO TNXA TNXB STK19
nsv428141	Chr.6:31903735 - 32125066 on Build GRCh38	Gain+Loss	CYP21A2 CFB C4B SKIV2L C4A CYP21A1P ATF6B DXO TNXA C2 C2-AS1 MIR1236 NELFE TNXB STK19
nsv1126749	Chr.6:31457323 - 32594423 on Build GRCh38	Deletion	GPANK1 NCR3 SKIV2L SNORD117 AIF1 ATF6B SAPCD1 MIR6832 TNXA DDX39B C6orf25 HCP5 APOM MSH5-SAPCD1 BTNL2 ATP6V1G2-DDX39B HSPA1L CLIC1 TNF MIR1236 LTB AGPAT1 LOC100507547 TNXB STK19 NOTCH4 SLC44A4 PBX2 CFB NFKBIL1 NEU1 FKBPL DDX39B-AS1 LOC102725068 DXO C6orf47 GPSM3 LY6G6D C2-AS1 LOC101929163 PRRT1 MIR4646 CSNK2B MSH5 LSM2 HLA-DRB6 C6orf10 HSPA1A ABHD16A EGFL8 CYP21A2 LY6G5B SNORA38 LST1 LY6G6E ZBTB12 SNORD52 LY6G6F C2 HLA-DRB1 SAPCD1-AS1 HLA-DRA LY6G5C DDAH2 BAG6 ATP6V1G2 HSPA1B SNORD84 C4B C4A RNF5 CYP21A1P HCG23 VWA7 HLA-DRB5 AGER LOC100287329 PRRC2A C6orf48 PPT2-EGFL8 MCCD1 LTA PPT2 SNORD48 MIR6833 MICB NELFE LY6G6C HCG26 MIR6721 VARS EHMT2
dgv10403n54	Chr.6:31312324 - 32049763 on Build GRCh38	Loss	GPANK1 NCR3 SKIV2L SNORD117 AIF1 SAPCD1 MIR6832 TNXA DDX39B C6orf25 HCP5 APOM MSH5-SAPCD1 ATP6V1G2-DDX39B HSPA1L CLIC1 TNF MIR1236 MICA LTB TNXB STK19 SLC44A4 CFB NFKBIL1 NEU1 MIR6891 DDX39B-AS1 LOC102725068 DXO C6orf47 LY6G6D C2-AS1 MIR4646 CSNK2B MSH5 LSM2 HSPA1A ABHD16A CYP21A2 LY6G5B SNORA38 LST1 LY6G6E ZBTB12 SNORD52 LY6G6F C2 SAPCD1-AS1 LY6G5C DDAH2 BAG6 ATP6V1G2 HSPA1B SNORD84 C4B HLA-B C4A CYP21A1P VWA7 LOC100287329 PRRC2A C6orf48 MCCD1 LTA SNORD48 MICB NELFE LY6G6C HCG26 VARS EHMT2
nsv1073969	Chr.6:31456422 - 33480523 on Build GRCh38	Deletion	NCR3 SKIV2L AIF1 ATF6B LOC100294145 SAPCD1 RPS18 MIR6832 PSMB8-AS1 DDX39B C6orf25 PFDN6 HCP5 APOM MSH5-SAPCD1 BTNL2 HSPA1L CLIC1 TNF MIR1236 LTB AGPAT1 LOC100507547 STK19 NOTCH4 SLC44A4 NEU1 DDX39B-AS1 HLA-DPB2 DXO LY6G6D C2-AS1 LOC101929163 WDR46 MIR4646 MSH5 LSM2 HLA-DRB6 HSPA1A ABHD16A ZBTB9 LY6G5B HCG24 CUTA SNORA38 RING1 LST1 ZBTB12 SNORD52 HLA-DPA1 HLA-DQB2 SAPCD1-AS1 KIFC1 PSMB8 MIR6873 DAXX C4A RNF5 HCG23 TAP2 TAPBP COL11A2 HCG25 LOC100287329 PRRC2A C6orf48 PPT2-EGFL8 MIR3135B HLA-DQA1 MCCD1 PPT2 PPP1R2P1 SNORD48 MIR6833 MICB TAP1 NELFE LY6G6C HLA-DPB1 PSMB9 EHMT2 GPANK1 HLA-DQB1-AS1 SNORD117 TNXA MIR6834 ATP6V1G2-DDX39B HLA-DMA MIR219A1 HSD17B8 HLA-DOA TNXB HLA-DOB HLA-DQB1 PBX2 SYNGAP1 CFB NFKBIL1 FKBPL RGL2 LOC102725068 HLA-DMB C6orf47 ZBTB22 GPSM3 PRRT1 VPS52 CSNK2B C6orf10 B3GALT4 EGFL8 CYP21A2 LY6G6E SLC39A7 LY6G6F C2 HLA-DRB1 HLA-DRA LY6G5C DDAH2 HLA-DQA2 BAG6 ATP6V1G2 HSPA1B SNORD84 C4B CYP21A1P VWA7 HLA-DRB5 AGER RXRB MIR5004 LTA HCG26 MIR6721 VARS PHF1 BRD2
nsv1112900	Chr.6:31455323 - 33480423 on Build GRCh38	Deletion	NCR3 SKIV2L AIF1 ATF6B LOC100294145 SAPCD1 RPS18 MIR6832 PSMB8-AS1 DDX39B C6orf25 PFDN6 HCP5 APOM MSH5-SAPCD1 BTNL2 HSPA1L CLIC1 TNF MIR1236 LTB AGPAT1 LOC100507547 STK19 NOTCH4 SLC44A4 NEU1 DDX39B-AS1 HLA-DPB2 DXO LY6G6D C2-AS1 LOC101929163 WDR46 MIR4646 MSH5 LSM2 HLA-DRB6 HSPA1A ABHD16A ZBTB9 LY6G5B HCG24 CUTA SNORA38 RING1 LST1 ZBTB12 SNORD52 HLA-DPA1 HLA-DQB2 SAPCD1-AS1 KIFC1 PSMB8 MIR6873 DAXX C4A RNF5 HCG23 TAP2 TAPBP COL11A2 HCG25 LOC100287329 PRRC2A C6orf48 PPT2-EGFL8 MIR3135B HLA-DQA1 MCCD1 PPT2 PPP1R2P1 SNORD48 MIR6833 MICB TAP1 NELFE LY6G6C HLA-DPB1 PSMB9 EHMT2 GPANK1 HLA-DQB1-AS1 SNORD117 TNXA MIR6834 ATP6V1G2-DDX39B HLA-DMA MIR219A1 HSD17B8 HLA-DOA TNXB HLA-DOB HLA-DQB1 PBX2 SYNGAP1 CFB NFKBIL1 FKBPL RGL2 LOC102725068 HLA-DMB C6orf47 ZBTB22 GPSM3 PRRT1 VPS52 CSNK2B C6orf10 B3GALT4 EGFL8 CYP21A2 LY6G6E SLC39A7 LY6G6F C2 HLA-DRB1 HLA-DRA LY6G5C DDAH2 HLA-DQA2 BAG6 ATP6V1G2 HSPA1B SNORD84 C4B CYP21A1P VWA7 HLA-DRB5 AGER RXRB MIR5004 LTA HCG26 MIR6721 VARS PHF1 BRD2
nsv830628	Chr.6:31919777 - 31979823 on Build GRCh38	Loss	CFB SKIV2L MIR1236 DXO NELFE STK19 C2 C2-AS1
dgv10404n54	Chr.6:31312550 - 32516591 on Build GRCh38	Loss	GPANK1 NCR3 SKIV2L SNORD117 AIF1 ATF6B SAPCD1 MIR6832 TNXA DDX39B C6orf25 HCP5 APOM MSH5-SAPCD1 BTNL2 ATP6V1G2-DDX39B HSPA1L CLIC1 TNF MIR1236 MICA LTB AGPAT1 LOC100507547 TNXB STK19 NOTCH4 SLC44A4 PBX2 CFB NFKBIL1 NEU1 FKBPL MIR6891 DDX39B-AS1 LOC102725068 DXO C6orf47 GPSM3 LY6G6D C2-AS1 LOC101929163 PRRT1 MIR4646 CSNK2B MSH5 LSM2 C6orf10 HSPA1A ABHD16A EGFL8 CYP21A2 LY6G5B SNORA38 LST1 LY6G6E ZBTB12 SNORD52 LY6G6F C2 SAPCD1-AS1 HLA-DRA LY6G5C DDAH2 BAG6 ATP6V1G2 HSPA1B SNORD84 C4B HLA-B C4A RNF5 CYP21A1P HCG23 VWA7 AGER LOC100287329 PRRC2A C6orf48 PPT2-EGFL8 MCCD1 LTA PPT2 SNORD48 MIR6833 MICB NELFE LY6G6C HCG26 MIR6721 VARS EHMT2
nsv284	Chr.6:31957962 - 32028944 on Build GRCh38	Deletion	C4B SKIV2L C4A CYP21A1P DXO NELFE TNXA STK19

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

non-receptor serine/threonine protein kinase

Gene Ontology Categories:

Process(es)

protein phosphorylation

Function(s)

protein serine/threonine kinase activity
ATP binding