Name: [Hs00838496_cn] [PCDHA1]
Creator: Thermo Fisher Scientific
Keywords: [PCDHA1] Assay, [protocadherin alpha 1] Assay

Assay Details

Target Gene Details

Entrez Gene ID:	56147
Gene Name:	protocadherin alpha 1
Gene Aliases:	PCDH-ALPHA1
Location:	Chr.5:140786136-141012344 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
PCDHA1	NM_018900.3	NP_061723.1
	NM_031411.2	NP_113599.1
	AF152305.1	AAD43699.1
	AF169695.1	AAF89692.1

Target Gene Details

Entrez Gene ID:	56146
Gene Name:	protocadherin alpha 2
Gene Aliases:	PCDH-ALPHA2
Location:	Chr.5:140794859-141012344 on Build GRCh38
Assay Gene Location:	Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHA2	NM_018905.2			NP_061728.1
PCDHA2	AF152310.1			AAD43704.1

Target Gene Details

Entrez Gene ID:	56145
Gene Name:	protocadherin alpha 3
Gene Aliases:	PCDH-ALPHA3
Location:	Chr.5:140801198-141012344 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHA3	NM_018906.2			NP_061729.1
PCDHA3	AF152311.1			AAD43705.1

Target Gene Details

Entrez Gene ID:	56144
Gene Name:	protocadherin alpha 4
Gene Aliases:	CNR1, CNRN1, CRNR1, PCDH-ALPHA4
Location:	Chr.5:140807074-141012344 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
PCDHA4	NM_018907.3	NP_061730.1
	AB208925.1	BAD92162.1
	AF152312.1	AAD43706.1

Target Gene Details

Entrez Gene ID:	56143
Gene Name:	protocadherin alpha 5
Gene Aliases:	CNR6, CNRN6, CNRS6, CRNR6, PCDH-ALPHA5
Location:	Chr.5:140821776-141012344 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
PCDHA5	NM_018908.2	NP_061731.1
	AB208863.1	BAD92100.1
	AF152313.1	AAD43707.1
	BC033735.1	AAH33735.1

Target Gene Details

Entrez Gene ID:	56142
Gene Name:	protocadherin alpha 6
Gene Aliases:	CNR2, CNRN2, CNRS2, CRNR2, PCDH-ALPHA6
Location:	Chr.5:140827922-141012344 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Protein ID
PCDHA6	NM_018909.3	NP_061732.1
	NM_031849.2	NP_114037.1
	AB209205.1	BAD92442.1
	AF152314.1	AAD43708.1
	AF169694.1	AAF89691.1
	BC036674.2	AAH36674.1

Target Gene Details

Entrez Gene ID:	56141
Gene Name:	protocadherin alpha 7
Gene Aliases:	CNR4, CNRN4, CNRS4, CRNR4, PCDH-ALPHA7
Location:	Chr.5:140834384-141012344 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHA7	NM_018910.2			NP_061733.1
PCDHA7	AF152315.1			AAD43709.1

Target Gene Details

Entrez Gene ID:	56140
Gene Name:	protocadherin alpha 8
Gene Aliases:	PCDH-ALPHA8
Location:	Chr.5:140841322-141012344 on Build GRCh38
Assay Gene Location:	Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHA8	NM_018911.2			NP_061734.1
PCDHA8	AF152316.1			AAD43710.1

Target Gene Details

Entrez Gene ID:	9752
Gene Name:	protocadherin alpha 9
Gene Aliases:	PCDH-ALPHA9
Location:	Chr.5:140847772-141012344 on Build GRCh38
Assay Gene Location:	Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PCDHA9	NM_014005.4	1	571	NP_054724.1
	NM_031857.1	1	571	NP_114063.1
	AB002343.1	1	571
	AJ007610.1	1	880	CAC22257.1
	AK314303.1
	BC104802.1			AAI04803.1
	BC104804.1			AAI04805.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv964953	Chr.5:140848155 - 140850849 on Build GRCh38	Duplication	PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
nsv437955	Chr.5:140848387 - 140850586 on Build GRCh38	Loss	PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
nsv599839	Chr.5:140837299 - 140848579 on Build GRCh38	Gain	PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
nsv819207	Chr.5:140842721 - 140859461 on Build GRCh38	Gain	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
esv33939	Chr.5:140837491 - 140859238 on Build GRCh38	Gain+Loss	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
dgv1651e212	Chr.5:140838196 - 140852242 on Build GRCh38	Loss	PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
nsv10753	Chr.5:140842575 - 140859579 on Build GRCh38	Gain	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
esv2759382	Chr.5:140777355 - 141449115 on Build GRCh38	Gain	PCDHA10 PCDHB3 PCDHB15 PCDHGA1 PCDHGA9 PCDHGB4 PCDHGA8 SLC25A2 PCDHGB7 PCDHA6 PCDHB13 PCDHGB6 PCDHB11 PCDHB8 PCDHA1 PCDHGB5 PCDHGA4 PCDHGB2 PCDHA3 PCDHB6 PCDHB5 PCDHA5 PCDHB19P PCDHB17P PCDHGA2 PCDHGB8P PCDHGA12 PCDHA13 PCDHGA7 PCDHA7 PCDHA12 PCDHA2 PCDHB14 PCDHB7 PCDHA8 PCDHGA5 PCDHAC2 PCDHB10 PCDHB16 PCDHA9 PCDHB12 PCDHB18P PCDHGA10 PCDHB9 LOC101926905 PCDHGA6 PCDHGB1 PCDHB1 PCDHAC1 PCDHB4 PCDHGA3 PCDHB2 PCDHA4 TAF7 PCDHGB3 PCDHGA11 PCDHA11
dgv138e203	Chr.5:140838209 - 140874533 on Build GRCh38	Loss	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA11 PCDHA7 PCDHA6 PCDHA2
dgv1653e212	Chr.5:140839141 - 140874132 on Build GRCh38	Loss	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA11 PCDHA7 PCDHA6 PCDHA2
nsv1133616	Chr.5:140842215 - 140848715 on Build GRCh38	Deletion	PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
esv3606958	Chr.5:140842689 - 140859762 on Build GRCh38	Loss	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
nsv442962	Chr.5:140844251 - 140864171 on Build GRCh38	Loss	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
esv3566721	Chr.5:140840563 - 140861415 on Build GRCh38	Deletion	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
nsv514324	Chr.5:140844231 - 140859031 on Build GRCh38	Loss	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
dgv971n67	Chr.5:140842564 - 140859431 on Build GRCh38	Loss	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
dgv724n27	Chr.5:140847633 - 140852761 on Build GRCh38	Loss	PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
nsv1024237	Chr.5:140810775 - 140852242 on Build GRCh38	Loss	PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
dgv1043e199	Chr.5:140842260 - 140861207 on Build GRCh38	Deletion	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
dgv3182n106	Chr.5:140842552 - 140859353 on Build GRCh38	Deletion	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
esv2730839	Chr.5:140842540 - 140859393 on Build GRCh38	Deletion	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
nsv830508	Chr.5:140675388 - 140869073 on Build GRCh38	Loss	PCDHA10 PCDHA5 HARS VTRNA1-2 HARS2 PCDHA7 ZMAT2 PCDHA2 VTRNA1-1 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA11 PCDHA6 VTRNA1-3
esv2861013	Chr.5:140834461 - 140848573 on Build GRCh38	Duplication	PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
nsv599841	Chr.5:140841349 - 140856513 on Build GRCh38	Loss	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
dgv10094n54	Chr.5:140846323 - 140860465 on Build GRCh38	Loss	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
dgv10092n54	Chr.5:140835344 - 140850785 on Build GRCh38	Loss	PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
esv29977	Chr.5:140843471 - 140856955 on Build GRCh38	Gain	PCDHA10 PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2
dgv1044e199	Chr.5:140843360 - 140849907 on Build GRCh38	Deletion	PCDHA5 PCDHA4 PCDHA1 PCDHA8 PCDHA3 PCDHA9 PCDHA7 PCDHA6 PCDHA2

More Information

Set Membership:

Intragenic

Exonic

Intronic

Non-exonic

DGV Variation

Panther Classification:

Molecular Function -

cadherin

Gene Ontology Categories:

Function(s) Process(es)

Name
Phone number
Email
Budget number
PI Name
PI Email
Building and Room number
Pickup Delivery

Availability	Made To Order
Catalog #	4400291
Price
Your Price
Online offer:


Check your price ›

Welcome to fishersci.com

System Message

Genomic Map

Assay Details

Target Gene Details

Entrez Gene ID:

Gene Name:

Gene Aliases:

Location:

Assay Gene Location:

Target Gene Details

Entrez Gene ID:

Gene Name:

Gene Aliases:

Location:

Assay Gene Location:

Target Gene Details

Entrez Gene ID:

Gene Name:

Gene Aliases:

Location:

Assay Gene Location:

Target Gene Details

Entrez Gene ID:

Gene Name:

Gene Aliases:

Location:

Assay Gene Location:

Target Gene Details

Entrez Gene ID:

Gene Name:

Gene Aliases:

Location:

Assay Gene Location:

Target Gene Details

Entrez Gene ID:

Gene Name:

Gene Aliases:

Location:

Assay Gene Location:

Target Gene Details

Entrez Gene ID:

Gene Name:

Gene Aliases:

Location:

Assay Gene Location:

Target Gene Details

Entrez Gene ID:

Gene Name:

Gene Aliases:

Location:

Assay Gene Location:

Target Gene Details

Entrez Gene ID:

Gene Name:

Gene Aliases:

Location:

Assay Gene Location:

Target Copy Number Variation Details

DGV Version:

More Information

Set Membership:

Panther Classification:

Molecular Function -

Gene Ontology Categories:

Related Products

Your items have has been added!