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See other SNRNP200 CNV Assays ›
Gene Symbol
SNRNP200
Assay Reference Genome
Location

Chr.2:96278904 on build GRCh38
Cytoband
2q11.2
Assay ID Hs00841460_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 23020

Gene Name:

 small nuclear ribonucleoprotein U5 subunit 200

Gene Aliases:

 ASCC3L1, BRR2, HELIC2, RP33, U5-200KD

Location:

 Chr.2:96274336-96321893 on Build GRCh38

Assay Gene Location:

 Within Exon 39
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SNRNP200 NM_014014.4 37 5360 NP_054733.2
XM_017003603.1 39 6190 XP_016859092.1
AB018331.2 35 4898 BAA34508.2
AF085356.1 7 1202 AAD40191.1
AK023840.1 31 4371 BAB14698.1
AK024391.1 31 4441 BAB14906.1
AK026662.1 5 482
AK090671.1 BAC03499.1
AK303465.1 8 1197
AK303663.1 8 1052
AL831994.1 28 4076
AY572488.1 37 5306 AAS78571.1
BC001417.2 3 304 AAH01417.4
BC007577.1 19 2744 AAH07577.1
BC065924.1 30 4283 AAH65924.1
BC112891.1 31 4481
BC131784.1 7 892

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv834305 Chr.2:96183160 - 96353738 on Build GRCh38 Gain LOC105373495 SNRNP200 CIAO1 TMEM127 ITPRIPL1 NCAPH STARD7-AS1 STARD7
dgv607e201 Chr.2:95855884 - 97561622 on Build GRCh38 Deletion ARID5A LOC101927053 LOC653924 LOC105373495 ANKRD36B ASTL ITPRIPL1 LOC100506076 ADRA2B LOC105373496 NEURL3 GPAT2 SEMA4C ANKRD36 KANSL3 FER1L5 DUSP2 LOC100506123 CNNM4 LMAN2L FAHD2B LOC107984110 FAM178B ANKRD23 FAHD2CP STARD7-AS1 STARD7 CNNM3 SNRNP200 CIAO1 TMEM127 ANKRD36C MIR3127 ANKRD39 NCAPH
nsv508155 Chr.2:96268957 - 96472565 on Build GRCh38 Deletion LOC105373495 SNRNP200 CIAO1 ITPRIPL1 NCAPH
nsv1135873 Chr.2:95981454 - 97579645 on Build GRCh38 Deletion ARID5A LOC101927053 LOC653924 LOC105373495 ANKRD36B ASTL ITPRIPL1 LOC100506076 ADRA2B LOC105373496 NEURL3 GPAT2 SEMA4C ANKRD36 KANSL3 FER1L5 DUSP2 LOC100506123 CNNM4 LMAN2L FAHD2B LOC107984110 FAM178B ANKRD23 FAHD2CP STARD7-AS1 STARD7 CNNM3 SNRNP200 CIAO1 TMEM127 ANKRD36C MIR3127 ANKRD39 NCAPH
esv3425717 Chr.2:95859900 - 97515905 on Build GRCh38 Duplication ARID5A LOC101927053 LOC653924 LOC105373495 ANKRD36B ASTL ITPRIPL1 LOC100506076 ADRA2B LOC105373496 NEURL3 GPAT2 SEMA4C ANKRD36 KANSL3 FER1L5 DUSP2 LOC100506123 CNNM4 LMAN2L FAHD2B LOC107984110 FAM178B ANKRD23 FAHD2CP STARD7-AS1 STARD7 CNNM3 SNRNP200 CIAO1 TMEM127 ANKRD36C MIR3127 ANKRD39 NCAPH

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