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See other SNRNP200 CNV Assays ›
Gene Symbol
SNRNP200
Assay Reference Genome
Location

Chr.2:96278904 on build GRCh38
Cytoband
2q11.2
Assay ID Hs00841460_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 23020

Gene Name:

 small nuclear ribonucleoprotein U5 subunit 200

Gene Aliases:

 ASCC3L1, BRR2, HELIC2, RP33, U5-200KD

Location:

 Chr.2:96274336-96321893 on Build GRCh38

Assay Gene Location:

 Within Exon 39
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SNRNP200 NM_014014.4 37 5360 NP_054733.2
XM_017003603.1 39 6190 XP_016859092.1
AB018331.2 35 4898 BAA34508.2
AF085356.1 7 1202 AAD40191.1
AK023840.1 31 4371 BAB14698.1
AK024391.1 31 4441 BAB14906.1
AK026662.1 5 482
AK090671.1 BAC03499.1
AK303465.1 8 1197
AK303663.1 8 1052
AL831994.1 28 4076
AY572488.1 37 5306 AAS78571.1
BC001417.2 3 304 AAH01417.4
BC007577.1 19 2744 AAH07577.1
BC065924.1 30 4283 AAH65924.1
BC112891.1 31 4481
BC131784.1 7 892

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv834305 Chr.2:96183160 - 96353738 on Build GRCh38 Gain TMEM127 STARD7-AS1 LOC105373495 NCAPH ITPRIPL1 SNRNP200 STARD7 CIAO1
nsv508155 Chr.2:96268957 - 96472565 on Build GRCh38 Deletion LOC105373495 NCAPH ITPRIPL1 SNRNP200 CIAO1
dgv607e201 Chr.2:95855884 - 97561622 on Build GRCh38 Deletion LOC653924 ANKRD36B LOC105373496 GPAT2 LOC107984110 NEURL3 CNNM3 FAM178B LOC100506123 ANKRD36 MIR3127 LMAN2L ANKRD39 NCAPH LOC101927053 FAHD2B FER1L5 FAHD2CP CNNM4 ARID5A TMEM127 STARD7-AS1 LOC105373495 KANSL3 ITPRIPL1 ANKRD36C ADRA2B SEMA4C LOC100506076 ANKRD23 SNRNP200 ASTL STARD7 CIAO1 DUSP2
nsv1135873 Chr.2:95981454 - 97579645 on Build GRCh38 Deletion LOC653924 ANKRD36B LOC105373496 GPAT2 LOC107984110 NEURL3 CNNM3 FAM178B LOC100506123 ANKRD36 MIR3127 LMAN2L ANKRD39 NCAPH LOC101927053 FAHD2B FER1L5 FAHD2CP CNNM4 ARID5A TMEM127 STARD7-AS1 LOC105373495 KANSL3 ITPRIPL1 ANKRD36C ADRA2B SEMA4C LOC100506076 ANKRD23 SNRNP200 ASTL STARD7 CIAO1 DUSP2
esv3425717 Chr.2:95859900 - 97515905 on Build GRCh38 Duplication LOC653924 ANKRD36B LOC105373496 GPAT2 LOC107984110 NEURL3 CNNM3 FAM178B LOC100506123 ANKRD36 MIR3127 LMAN2L ANKRD39 NCAPH LOC101927053 FAHD2B FER1L5 FAHD2CP CNNM4 ARID5A TMEM127 STARD7-AS1 LOC105373495 KANSL3 ITPRIPL1 ANKRD36C ADRA2B SEMA4C LOC100506076 ANKRD23 SNRNP200 ASTL STARD7 CIAO1 DUSP2

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