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See other C21ORF58 CNV Assays ›
Gene Symbol
C21orf58
Assay Reference Genome
Location

Chr.21:46323669 on build GRCh38
Cytoband
21q22.3
Assay ID Hs00848219_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 54058

Gene Name:

 chromosome 21 open reading frame 58

Gene Aliases:

 -

Location:

 Chr.21:46300426-46323899 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
C21orf58 NM_001286476.1 1 231 NP_001273405.1
NM_001286477.1 1 189 NP_001273406.1
NM_058180.4 1 231 NP_478060.2
XM_005261148.4 1 218 XP_005261205.1
XM_006724018.3 1 218 XP_006724081.1
XM_011529619.2 1 218 XP_011527921.1
XM_011529620.2 1 218 XP_011527922.1
XM_011529621.2 1 218 XP_011527923.1
XM_011529623.2 1 218 XP_011527925.1
XM_011529626.2 1 218 XP_011527928.1
XM_011529627.2 1 218 XP_011527929.1
XM_011529628.1 1 218 XP_011527930.1
XM_017028388.1 1 218 XP_016883877.1
XM_017028389.1 1 218 XP_016883878.1
XM_017028390.1 1 218 XP_016883879.1
XM_017028391.1 1 218 XP_016883880.1
AK056387.1 1 203
BC121007.1 1 201
BC121008.1 1 201
DA920594.1 1 231

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv519904 Chr.21:46163592 - 46461396 on Build GRCh38 Loss MCM3AP-AS1 C21orf58 PCNT DIP2A LSS MCM3AP YBEY SPATC1L
nsv527355 Chr.21:46258860 - 46443112 on Build GRCh38 Gain C21orf58 PCNT MCM3AP YBEY
nsv470910 Chr.21:45933861 - 46665076 on Build GRCh38 Gain C21orf58 FTCD PCNT DIP2A PRMT2 LSS S100B MCM3AP-AS1 COL6A1 LOC101928796 MCM3AP YBEY PCBP3 COL6A2 DIP2A-IT1 SPATC1L
nsv587975 Chr.21:46241321 - 46410929 on Build GRCh38 Gain MCM3AP-AS1 C21orf58 PCNT MCM3AP YBEY
nsv1060978 Chr.21:46068159 - 46413726 on Build GRCh38 Gain MCM3AP-AS1 C21orf58 FTCD PCNT LSS MCM3AP YBEY COL6A2 SPATC1L

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More Information


Additional Information:

For this assay, SNP(s) [rs76328736] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

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