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See other LOC100289580 CNV Assays ›
Gene Symbol
LOC100289580
Assay Reference Genome
Location

Chr.16:88738114 on build GRCh38
Cytoband
16q24.3
Assay ID Hs00855239_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 100289580

Gene Name:

 uncharacterized LOC100289580

Gene Aliases:

 -

Location:

 Chr.16:88731180-88741425 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC100289580 NR_103774.1 2 563
AK127064.1 1 1315
AK294743.1 2 563

Target Gene Details

Entrez Gene ID:

 9780

Gene Name:

 piezo type mechanosensitive ion channel component 1

Gene Aliases:

 DHS, FAM38A, LMPH3, Mib

Location:

 Chr.16:88715338-88785220 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 7 - Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIEZO1 NM_001142864.3 NP_001136336.2
DV080349.1
DV080374.1
KC602455.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain GALNS SLC22A31 LOC107987238 TRAPPC2L LOC101927793 LOC100289580 LOC400558 APRT CBFA2T3 ZNF778 ACSF3 PABPN1L LOC100129697 CTU2 PIEZO1 LOC105371409 CDH15 LOC339059 CDT1 MIR4722 LINC00304
nsv471113 Chr.16:88650665 - 88764428 on Build GRCh38 Loss MVD LOC100289580 LOC339059 SNAI3-AS1 MIR4722 CTU2 RNF166 CYBA PIEZO1 SNAI3
nsv471114 Chr.16:88688461 - 88756339 on Build GRCh38 Gain LOC100289580 LOC339059 MIR4722 CTU2 RNF166 PIEZO1
dgv3064n100 Chr.16:88683753 - 88846491 on Build GRCh38 Gain GALNS LOC107987238 LOC100289580 APRT LOC339059 SNAI3-AS1 CDT1 MIR4722 CTU2 RNF166 PIEZO1 SNAI3
nsv517643 Chr.16:88713767 - 88756339 on Build GRCh38 Loss LOC100289580 LOC339059 MIR4722 CTU2 PIEZO1
nsv833327 Chr.16:88667431 - 88757621 on Build GRCh38 Loss LOC100289580 LOC339059 SNAI3-AS1 MIR4722 CTU2 RNF166 PIEZO1 SNAI3
nsv952070 Chr.16:88257295 - 88780192 on Build GRCh38 Deletion MVD LOC100289580 LOC107984862 SNAI3-AS1 ZNF469 ZFPM1 CTU2 RNF166 CYBA PIEZO1 SNAI3 ZC3H18 IL17C ZC3H18-AS1 MIR5189 LOC339059 MIR4722
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss GALNS PRDM7 LOC101927793 LOC100289580 APRT SPATA2L DPEP1 CDH15 LOC339059 VPS9D1 SPG7 TUBB3 FAM157C LINC00304 MVD DBNDD1 URAHP CBFA2T3 ACSF3 GAS8-AS1 FANCA CYBA SNAI3 LOC101927817 LOC105371419 TCF25 TRAPPC2L SNAI3-AS1 PABPN1L LOC100129697 AFG3L1P RNF166 SNORD68 MC1R ZNF276 SPIRE2 IL17C RPL13 LOC105371414 LOC107984817 CPNE7 MIR4722 LOC100287036 CENPBD1 SLC22A31 LOC107987238 SPATA33 LOC400558 CHMP1A ZNF778 ANKRD11 GAS8 CDK10 CTU2 PIEZO1 VPS9D1-AS1 LOC105371409 CDT1 DEF8 TUBB8P7
nsv1160442 Chr.16:88708161 - 88778524 on Build GRCh38 Deletion LOC100289580 LOC339059 MIR4722 CTU2 PIEZO1
nsv1927 Chr.16:88712585 - 88743583 on Build GRCh38 Insertion LOC100289580 LOC339059 MIR4722 CTU2 PIEZO1
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain GALNS LOC107987238 TRAPPC2L LOC101927793 LOC100289580 APRT CBFA2T3 PABPN1L LOC100129697 CTU2 PIEZO1 LOC105371409 LOC339059 CDT1 MIR4722

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