Genomic Map
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Target Gene Details
Entrez Gene ID: | 284415 |
Gene Name: | V-set and transmembrane domain containing 1 |
Gene Aliases: |
SIRL-1, SIRL1, UNQ3033 |
Location: |
Chr.19:54040825-54063966 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 11 - Intron 12 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| VSTM1 | NM_001288791.1 | NP_001275720.1 | ||
| NM_001288792.1 | NP_001275721.1 | |||
| NM_001288793.1 | NP_001275722.1 | |||
| NM_198481.3 | NP_940883.2 | |||
| NR_110142.1 | ||||
| XM_011526845.1 | XP_011525147.1 | |||
| XM_011526846.1 | XP_011525148.1 | |||
| XM_011526847.1 | XP_011525149.1 | |||
| XM_011526848.1 | XP_011525150.1 | |||
| XM_011526849.1 | XP_011525151.1 | |||
| AY358542.1 | AAQ88906.1 | |||
| BC100943.2 | AAI00944.1 | |||
| BG189223.1 | ||||
| BQ446114.1 | ||||
| DQ479397.1 | ||||
| FJ584316.1 | ||||
| FJ584317.1 | ||||
| FJ584318.1 | ||||
| FJ584319.1 | ||||
| FJ584320.1 | ||||
| FJ882051.1 | ||||
| FN398145.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv458782 | Chr.19:53961144 - 54093354 on Build GRCh38 | Gain |
 TARM1
VSTM1
CACNG8
CACNG6
MIR935
|
| nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion |
TFPT
TARM1
VSTM1
NDUFA3
PRPF31
OSCAR
|
| nsv1063127 | Chr.19:53926876 - 54068977 on Build GRCh38 | Gain |
VSTM1
CACNG8
CACNG7
CACNG6
MIR935
|
| nsv1057516 | Chr.19:53986233 - 54046901 on Build GRCh38 | Gain |
VSTM1
CACNG8
CACNG6
|
| esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion |
RPS9
MIR525
MIR520G
MIR518A1
MIR373
MIR519E
NLRP12
MIR1283-2
MIR371B
VN1R4
CACNG6
MIR526A1
ZNF813
MIR516B1
MIR516A1
MBOAT7
DPRX
VSTM1
ZNF765
LILRA6
FAM90A27P
MIR518A2
MIR517C
PRKCG
MIR516B2
MIR520F
MIR524
CACNG7
LENG1
MIR518F
MIR519A2
MIR521-1
MIR520C
ZNF677
ZNF525
MIR518C
MIR518B
MIR522
MIR371A
MIR520E
MYADM
CNOT3
MIR516A2
MIR515-1
MIR519A1
BIRC8
ZNF665
LOC284379
ZNF818P
MIR523
CACNG8
MIR526A2
PRPF31
MIR520H
MIR935
TPM3P9
ZNF845
MIR519B
MIR512-2
MIR519D
MIR512-1
ZNF761
LILRA5
MIR517B
LILRB5
MIR519C
MIR1323
MIR517A
MIR527
TFPT
TARM1
VN1R2
MIR520A
MIR518D
MIR372
MIR515-2
MIR520D
LILRB3
OSCAR
MIR520B
MIR518E
MIR1283-1
LOC105372457
TSEN34
MIR498
NDUFA3
MIR526B
ZNF331
TMC4
MIR4752
LILRB2
MIR521-2
|
| nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss |
TFPT
TARM1
VSTM1
NDUFA3
CACNG8
PRPF31
OSCAR
CACNG6
MIR935
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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