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See other SIGIRR CNV Assays ›
Gene Symbol
SIGIRR
Assay Reference Genome
Location

Chr.11:407535 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00873075_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 59307

Gene Name:

 single Ig and TIR domain containing

Gene Aliases:

 IL-1R8, TIR8

Location:

 Chr.11:405716-417454 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SIGIRR NM_001135053.1 NP_001128525.1
NM_001135054.1 NP_001128526.1
NM_021805.2 NP_068577.2
XM_005253044.2 XP_005253101.1
XM_005253045.1 XP_005253102.1
XM_005253046.1 XP_005253103.1
XM_005253048.4 XP_005253105.1
XM_017018099.1 XP_016873588.1
XM_017018100.1 XP_016873589.1
AK025099.1 BAB15066.1
AK093427.1
AK172830.1 BAD18795.1
AY358342.1 AAQ88708.1
BC003591.1 AAH03591.1
BC025953.1 AAH25953.1
BC106007.1 AAI06008.1
CR457338.1 CAG33619.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss IFITM3 LRRC56 MIR210 LMNTD2 PTDSS2 SIGIRR IFITM5 PHRF1 HRAS ANO9 LOC101059906 IFITM2 RASSF7 MIR210HG IFITM1 B4GALNT4 IRF7 RNH1 CDHR5 PGGHG PKP3 LOC143666
nsv467633 Chr.11:366710 - 432436 on Build GRCh38 Loss B4GALNT4 SIGIRR PKP3 ANO9
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss LRRC56 MIR6744 DEAF1 MIR210 RPLP2 PTDSS2 MUC5B SIGIRR LOC101927503 POLR2L TMEM80 MUC2 CEND1 ANO9 SLC25A22 SCT EPS8L2 CHID1 LOC101059906 PANO1 AP2A2 MUC6 DRD4 B4GALNT4 SNORA52 CDHR5 TSPAN4 LOC171391 LMNTD2 PNPLA2 PHRF1 HRAS CD151 MUC5AC TOLLIP PDDC1 CRACR2B RASSF7 MIR210HG TALDO1 IRF7 RNH1 PIDD1 PKP3 LOC143666
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain B4GALNT4 SIGIRR PKP3 ANO9
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion PTDSS2 B4GALNT4 SIGIRR RNH1 PKP3 ANO9
dgv1012n100 Chr.11:198510 - 427836 on Build GRCh38 Gain IFITM3 SIGIRR IFITM5 MIR6743 RIC8A ANO9 BET1L IFITM2 SIRT3 IFITM1 B4GALNT4 PSMD13 ODF3 NLRP6 PGGHG PKP3
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion PTDSS2 B4GALNT4 SIGIRR PKP3 ANO9
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion LRRC56 DEAF1 MIR210 RPLP2 PTDSS2 SIGIRR POLR2L TMEM80 CEND1 ANO9 SLC25A22 SCT EPS8L2 CHID1 LOC101059906 PANO1 AP2A2 DRD4 B4GALNT4 SNORA52 CDHR5 TSPAN4 LOC171391 LMNTD2 PNPLA2 PHRF1 HRAS CD151 PDDC1 CRACR2B RASSF7 MIR210HG TALDO1 IRF7 RNH1 PIDD1 PKP3 LOC143666
nsv552822 Chr.11:403545 - 408352 on Build GRCh38 Loss SIGIRR PKP3

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