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See other SIGIRR CNV Assays ›
Gene Symbol
SIGIRR
Assay Reference Genome
Location

Chr.11:407535 on build GRCh38
Cytoband
11p15.5
Assay ID Hs00873075_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 59307

Gene Name:

 single Ig and TIR domain containing

Gene Aliases:

 IL-1R8, TIR8

Location:

 Chr.11:405716-417454 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SIGIRR NM_001135053.1 NP_001128525.1
NM_001135054.1 NP_001128526.1
NM_021805.2 NP_068577.2
XM_005253044.2 XP_005253101.1
XM_005253045.1 XP_005253102.1
XM_005253046.1 XP_005253103.1
XM_005253048.4 XP_005253105.1
XM_017018099.1 XP_016873588.1
XM_017018100.1 XP_016873589.1
AK025099.1 BAB15066.1
AK093427.1
AK172830.1 BAD18795.1
AY358342.1 AAQ88708.1
BC003591.1 AAH03591.1
BC025953.1 AAH25953.1
BC106007.1 AAI06008.1
CR457338.1 CAG33619.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss RASSF7 ANO9 IFITM1 IFITM5 HRAS RNH1 IRF7 CDHR5 MIR210HG LRRC56 MIR210 PGGHG IFITM3 PTDSS2 IFITM2 SIGIRR B4GALNT4 PKP3 LOC143666 LOC101059906 PHRF1 LMNTD2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PDDC1 RPLP2 ANO9 SNORA52 IRF7 CDHR5 MIR210 MIR6744 TMEM80 B4GALNT4 LOC143666 CRACR2B CD151 SCT MUC6 MUC5AC PHRF1 CHID1 RASSF7 LOC171391 MUC5B PNPLA2 HRAS CEND1 TALDO1 RNH1 DEAF1 MIR210HG LRRC56 LOC101927503 MUC2 AP2A2 PTDSS2 SLC25A22 SIGIRR TOLLIP TSPAN4 PANO1 PKP3 DRD4 PIDD1 LOC101059906 EPS8L2 POLR2L LMNTD2
nsv552776 Chr.11:366710 - 432436 on Build GRCh38 Loss SIGIRR B4GALNT4 PKP3 ANO9
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion PTDSS2 SIGIRR B4GALNT4 PKP3 ANO9 RNH1
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain SIGIRR B4GALNT4 PKP3 ANO9
dgv1505n54 Chr.11:198510 - 470331 on Build GRCh38 Gain ANO9 IFITM1 MIR6743 IFITM5 RIC8A PGGHG IFITM3 PTDSS2 IFITM2 SIGIRR B4GALNT4 PKP3 NLRP6 SIRT3 ODF3 BET1L PSMD13
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion PTDSS2 SIGIRR B4GALNT4 PKP3 ANO9
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PDDC1 RPLP2 ANO9 SNORA52 IRF7 CDHR5 MIR210 TMEM80 B4GALNT4 LOC143666 CRACR2B CD151 SCT PHRF1 CHID1 RASSF7 LOC171391 PNPLA2 HRAS CEND1 TALDO1 RNH1 DEAF1 MIR210HG LRRC56 AP2A2 PTDSS2 SLC25A22 SIGIRR TSPAN4 PANO1 PKP3 DRD4 PIDD1 LOC101059906 EPS8L2 POLR2L LMNTD2
nsv552822 Chr.11:403545 - 408352 on Build GRCh38 Loss SIGIRR PKP3

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