Hs00876494_cn

• Gene Symbol: PGAP3
• Assay Reference Genome Location: Chr.17:39672813 on build GRCh38
• Cytoband: 17q12

Target Gene Details

• Entrez Gene ID: 93210
• Gene Name: post-GPI attachment to proteins 3
• Gene Aliases: AGLA546, CAB2, PERLD1, PP1498, hCOS16
• Location: Chr.17:39671122-39688070 on Build GRCh38
• Assay Gene Location: Within Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PGAP3	NM_001291726.1	7	856	NP_001278655.1
	NM_001291728.1	7	946	NP_001278657.1
	NM_001291730.1	6	667	NP_001278659.1
	NM_001291732.1	5	604	NP_001278661.1
	NM_001291733.1	4	542	NP_001278662.1
	NM_033419.4	8	1009	NP_219487.3
	XM_011525480.2	7	791	XP_011523782.1
	XM_011525481.2	9	1138	XP_011523783.1
	AB088396.1	8	961	BAC55580.1
	AF217980.1	5	404	AAG17223.1
	AK057911.1	8	1317
	AK075474.1	7	843	BAC11642.1
	AK289612.1	4	529
	AK294639.1	7	933
	AK301106.1	9	911
	AK314469.1
	AY358437.1	8	985	AAQ88803.1
	BC010652.1	8	970	AAH10652.2
	BG472165.1	6	630
	DC389056.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv528093	Chr.17:39657827 - 39709752 on Build GRCh38	Loss	STARD3 PGAP3 PNMT TCAP ERBB2
nsv516757	Chr.17:39625596 - 39678288 on Build GRCh38	Loss	STARD3 PGAP3 PNMT TCAP PPP1R1B
nsv574991	Chr.17:39613752 - 39674782 on Build GRCh38	Loss	STARD3 PGAP3 PNMT TCAP PPP1R1B
dgv40n68	Chr.17:39536627 - 39726611 on Build GRCh38	Loss	STARD3 MIR4728 NEUROD2 PGAP3 CDK12 PNMT TCAP ERBB2 PPP1R1B

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

GPI anchor metabolic process
GPI anchor biosynthetic process

Function(s)

hydrolase activity, acting on ester bonds