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See other ATG7 CNV Assays ›
Gene Symbol
ATG7
Assay Reference Genome
Location

Chr.3:11558520 on build GRCh38
Cytoband
3p25.3
Assay ID Hs00884889_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 10533

Gene Name:

 autophagy related 7

Gene Aliases:

 APG7-LIKE, APG7L, GSA7

Location:

 Chr.3:11272324-11564704 on Build GRCh38

Assay Gene Location:

 Within Intron 27
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATG7 XM_017005547.1 XP_016861036.1
XM_017005554.1 XP_016861043.1

Target Gene Details

Entrez Gene ID:

 9686

Gene Name:

 vestigial like family member 4

Gene Aliases:

 VGL-4

Location:

 Chr.3:11556067-11720768 on Build GRCh38

Assay Gene Location:

 Within Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
VGLL4 NM_001128219.2 5 1386 NP_001121691.1
NM_001128220.2 4 761 NP_001121692.1
NM_001128221.2 4 975 NP_001121693.1
NM_001284390.1 7 1430 NP_001271319.1
NM_001284391.1 5 1103 NP_001271320.1
NM_014667.3 6 1297 NP_055482.2
XM_011534267.2 7 1072 XP_011532569.1
XM_011534268.1 5 1400 XP_011532570.1
XM_011534269.1 5 1094 XP_011532571.1
XM_017007541.1 7 1095 XP_016863030.1
XM_017007542.1 6 1284 XP_016863031.1
AK126479.1 2 2020
AK130542.1 6 1092 BAC85375.1
AK300344.1 5 1103
AK307708.1 4 726
AK308761.1
BC001514.2 AAH01514.2
BC003038.1 AAH03038.1
D50911.3 6 1045

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion SEC13 FANCD2 LOC101927467 ATG7 VHL TAMM41 ATP2B2-IT2 BRK1 LINC00852 SLC6A1-AS1 MIR885 ATP2B2 VGLL4 FANCD2OS GHRLOS SLC6A1 MIR378B HRH1 TATDN2 IRAK2 GHRL LINC00606 SLC6A11
nsv955314 Chr.3:11552827 - 11568726 on Build GRCh38 Deletion ATG7 VGLL4
nsv517831 Chr.3:11541780 - 11576994 on Build GRCh38 Loss ATG7 VGLL4
esv2677845 Chr.3:11489013 - 11864643 on Build GRCh38 Deletion ATG7 TAMM41 VGLL4
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion SEC13 FANCD2 ATG7 FANCD2P2 TAMM41 BRK1 LINC00852 SLC6A1-AS1 EMC3 MIR885 ATP2B2 VGLL4 FANCD2OS LOC401052 SLC6A1 CIDECP GHRL SLC6A11 LOC101927467 VHL ATP2B2-IT2 GHRLOS MIR378B HRH1 TATDN2 IRAK2 LINC00606
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion SEC13 FANCD2 LOC101927467 ATG7 VHL FANCD2P2 TAMM41 ATP2B2-IT2 BRK1 LINC00852 SLC6A1-AS1 MIR885 ATP2B2 VGLL4 FANCD2OS GHRLOS SLC6A1 MIR378B HRH1 TATDN2 IRAK2 GHRL LINC00606 SLC6A11
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion SEC13 FANCD2 LOC101927467 ATG7 VHL FANCD2P2 TAMM41 ATP2B2-IT2 BRK1 LINC00852 SLC6A1-AS1 MIR885 ATP2B2 VGLL4 FANCD2OS GHRLOS SLC6A1 MIR378B HRH1 TATDN2 IRAK2 GHRL LINC00606 SLC6A11
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion SEC13 FANCD2 ATG7 FANCD2P2 TAMM41 BRK1 LINC00852 SLC6A1-AS1 EMC3 MIR885 ATP2B2 VGLL4 FANCD2OS LOC401052 SLC6A1 CIDECP GHRL SLC6A11 LOC101927467 VHL ATP2B2-IT2 GHRLOS MIR378B HRH1 TATDN2 IRAK2 EMC3-AS1 LINC00606

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