Hs00890015_cn

• Gene Symbol: TMEM256
• Assay Reference Genome Location: Chr.17:7403705 on build GRCh38
• Cytoband: 17p13.1

Target Gene Details

• Entrez Gene ID: 254863
• Gene Name: transmembrane protein 256
• Gene Aliases: C17orf61
• Location: Chr.17:7402974-7404131 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256	NM_152766.3			NP_689979.1
	BC030270.2			AAH30270.1
	BM749297.1
	CB140450.1
	EB386328.1

Target Gene Details

• Entrez Gene ID: 100529211
• Gene Name: TMEM256-PLSCR3 readthrough (NMD candidate)
• Gene Aliases: C17orf61-PLSCR3
• Location: Chr.17:7389727-7404131 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256-PLSCR3	NR_037719.1
	AK055822.1
	AK290117.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422288	Chr.17:6789933 - 7646709 on Build GRCh38	Deletion	ASGR2 GABARAP ELP5 BCL6B CD68 TMEM95 FBXO39 MIR195 C17orf74 SHBG SNORA48 MIR497 ACAP1 SENP3-EIF4A1 TNK1 SNORD10 ALOX12 SLC16A13 TNFSF12 ALOX12P2 TMEM256 EIF5A TNFSF13 YBX2 ALOX12-AS1 DLG4 SLC2A4 FXR2 ATP1B2 TMEM102 CHRNB1 TMEM256-PLSCR3 MIR324 CTDNEP1 KCTD11 RNASEK-C17orf49 PHF23 SPEM1 SLC16A11 CLEC10A SLC35G6 CLDN7 SENP3 GPS2 SNORA67 DVL2 SOX15 TEKT1 RNASEK EIF4A1 ZBTB4 SAT2 ACADVL MPDU1 ASGR1 C17orf49 TNFSF12-TNFSF13 NLGN2 LOC100996842 LOC107983988 FGF11 PLSCR3 POLR2A NEURL4 MIR497HG
nsv523672	Chr.17:7379825 - 7549660 on Build GRCh38	Loss	CHRNB1 TMEM256-PLSCR3 ZBTB4 TNK1 SPEM1 TNFSF12-TNFSF13 TNFSF12 NLGN2 LOC107983988 TMEM256 C17orf74 FGF11 SLC35G6 PLSCR3 POLR2A TMEM102
esv2662967	Chr.17:7403326 - 7408473 on Build GRCh38	Deletion	TMEM256-PLSCR3 NLGN2 TMEM256
esv1007381	Chr.17:7391600 - 7405025 on Build GRCh38	Deletion	TMEM256-PLSCR3 TMEM256 PLSCR3
nsv952118	Chr.17:7174582 - 7456981 on Build GRCh38	Deletion	CHRNB1 TMEM256-PLSCR3 GABARAP ELP5 MIR324 CTDNEP1 KCTD11 PHF23 TMEM95 SPEM1 C17orf74 CLDN7 GPS2 DVL2 ACAP1 TNK1 ACADVL ASGR1 NLGN2 LOC107983988 TMEM256 EIF5A YBX2 FGF11 PLSCR3 DLG4 SLC2A4 NEURL4 TMEM102
nsv470575	Chr.17:7388788 - 7432736 on Build GRCh38	Loss	SPEM1 TMEM256-PLSCR3 NLGN2 LOC107983988 TMEM256 C17orf74 PLSCR3 TNK1
nsv457659	Chr.17:7010333 - 7689462 on Build GRCh38	Loss	ASGR2 GABARAP ELP5 BCL6B CD68 TMEM95 MIR195 C17orf74 SHBG SNORA48 MIR497 WRAP53 ACAP1 SENP3-EIF4A1 TNK1 SNORD10 ALOX12 SLC16A13 TNFSF12 TMEM256 EIF5A TNFSF13 YBX2 ALOX12-AS1 DLG4 SLC2A4 FXR2 ATP1B2 TMEM102 CHRNB1 TMEM256-PLSCR3 MIR324 CTDNEP1 KCTD11 RNASEK-C17orf49 PHF23 SPEM1 SLC16A11 CLEC10A SLC35G6 CLDN7 TP53 SENP3 GPS2 SNORA67 DVL2 SOX15 RNASEK EIF4A1 ZBTB4 SAT2 ACADVL MPDU1 ASGR1 C17orf49 TNFSF12-TNFSF13 NLGN2 LOC100996842 LOC107983988 FGF11 PLSCR3 POLR2A NEURL4 MIR497HG

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function