Hs00890015_cn

• Gene Symbol: TMEM256
• Assay Reference Genome Location: Chr.17:7403705 on build GRCh38
• Cytoband: 17p13.1

Target Gene Details

• Entrez Gene ID: 254863
• Gene Name: transmembrane protein 256
• Gene Aliases: C17orf61
• Location: Chr.17:7402974-7404131 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256	NM_152766.3			NP_689979.1
	BC030270.2			AAH30270.1
	BM749297.1
	CB140450.1
	EB386328.1

Target Gene Details

• Entrez Gene ID: 100529211
• Gene Name: TMEM256-PLSCR3 readthrough (NMD candidate)
• Gene Aliases: C17orf61-PLSCR3
• Location: Chr.17:7389727-7404131 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TMEM256-PLSCR3	NR_037719.1
	AK055822.1
	AK290117.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2422288	Chr.17:6789933 - 7646709 on Build GRCh38	Deletion	MIR195 SNORD10 C17orf49 EIF4A1 DVL2 YBX2 SLC35G6 TMEM102 ALOX12-AS1 TNFSF12-TNFSF13 SENP3 EIF5A PHF23 GPS2 ALOX12 ASGR1 SAT2 ELP5 C17orf74 ALOX12P2 SENP3-EIF4A1 SHBG ZBTB4 NLGN2 LOC100996842 FGF11 SPEM1 ACAP1 TNK1 TMEM256-PLSCR3 ASGR2 SOX15 KCTD11 TMEM95 TMEM256 ATP1B2 GABARAP MPDU1 CLEC10A NEURL4 PLSCR3 FBXO39 SLC16A11 CLDN7 MIR497 POLR2A SLC16A13 CD68 SLC2A4 MIR324 TEKT1 MIR497HG BCL6B SNORA48 FXR2 RNASEK-C17orf49 CTDNEP1 DLG4 CHRNB1 ACADVL LOC107983988 TNFSF13 RNASEK SNORA67 TNFSF12
esv2662967	Chr.17:7403326 - 7408473 on Build GRCh38	Deletion	TMEM256-PLSCR3 TMEM256 NLGN2
nsv523672	Chr.17:7379825 - 7549660 on Build GRCh38	Loss	C17orf74 SLC35G6 ZBTB4 TMEM102 TNFSF12-TNFSF13 NLGN2 PLSCR3 FGF11 CHRNB1 POLR2A SPEM1 TNK1 LOC107983988 TMEM256-PLSCR3 TMEM256 TNFSF12
esv1007381	Chr.17:7391600 - 7405025 on Build GRCh38	Deletion	TMEM256-PLSCR3 TMEM256 PLSCR3
nsv952118	Chr.17:7174582 - 7456981 on Build GRCh38	Deletion	GABARAP DVL2 YBX2 NEURL4 TMEM102 PLSCR3 CLDN7 EIF5A PHF23 GPS2 SLC2A4 ASGR1 MIR324 ELP5 C17orf74 NLGN2 CTDNEP1 FGF11 DLG4 CHRNB1 SPEM1 ACAP1 TNK1 ACADVL LOC107983988 TMEM256-PLSCR3 KCTD11 TMEM95 TMEM256
nsv470575	Chr.17:7388788 - 7432736 on Build GRCh38	Loss	C17orf74 SPEM1 TNK1 LOC107983988 TMEM256-PLSCR3 TMEM256 NLGN2 PLSCR3
nsv574322	Chr.17:7010333 - 7689462 on Build GRCh38	Loss	MIR195 SNORD10 C17orf49 EIF4A1 DVL2 YBX2 SLC35G6 TMEM102 ALOX12-AS1 TNFSF12-TNFSF13 SENP3 EIF5A PHF23 GPS2 ALOX12 ASGR1 SAT2 ELP5 C17orf74 SENP3-EIF4A1 SHBG ZBTB4 NLGN2 LOC100996842 FGF11 SPEM1 ACAP1 TNK1 TMEM256-PLSCR3 ASGR2 SOX15 KCTD11 TMEM95 TMEM256 ATP1B2 GABARAP MPDU1 CLEC10A NEURL4 PLSCR3 SLC16A11 CLDN7 MIR497 POLR2A SLC16A13 CD68 SLC2A4 MIR324 MIR497HG BCL6B TP53 SNORA48 FXR2 RNASEK-C17orf49 CTDNEP1 DLG4 CHRNB1 WRAP53 ACADVL LOC107983988 TNFSF13 RNASEK SNORA67 TNFSF12

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

molecular_function