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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1293588 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00899971_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Within Exon 25
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 24 2555 NP_085152.2
XM_005244715.2 23 2492 XP_005244772.1
XM_005244717.3 12 1549 XP_005244774.1
XM_011540606.2 24 2604 XP_011538908.1
XM_011540607.1 24 5028 XP_011538909.1
XM_011540608.2 23 2509 XP_011538910.1
XM_011540609.2 23 2506 XP_011538911.1
XM_017000233.1 24 2744 XP_016855722.1
AB051503.1 22 4121 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC004874.2 9 1159 AAH04874.2
BC021851.1 7 945 AAH21851.1
BC029929.1 4 358 AAH29929.1
BC051194.1 24 2555 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss MIR6726 SCNN1D ACAP3 UBE2J2
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss MIR6726 MMP23A CALML6 FAM132A PLEKHN1 MTND2P28 LOC105378949 LOC100288175 CPSF3L SDF4 LOC284600 PRKCZ LOC100506504 LOC100133331 FAM41C DDX11L1 LOC729737 LOC102725121 OR4F5 B3GALT6 CDK11A LOC107984841 LOC100287934 MIR1302-2 TMEM240 CFAP74 TTLL10-AS1 ANKRD65 MXRA8 LOC100132287 LOC102724312 LOC105378592 MORN1 WASH7P HES4 ATAD3A DVL1 AURKAIP1 OR4F16 LINC01342 PERM1 CPTP GNB1 NOC2L MRPL20 TMEM52 AGRN SLC35E2 ATAD3C GABRD RNF223 LOC107985728 NADK ISG15 OR4F29 TAS1R3 FAAP20 MIR200B UBE2J2 MIR6859-2 MIR429 FAM87B LOC105378589 LOC105378948 PUSL1 LOC148413 MIR200A LOC100130417 MIR6808 LINC00115 LINC01128 SKI LOC100134822 ATAD3B LOC100129534 MIR6727 LOC105378591 FNDC10 MMP23B LOC100288069 FAM138A TTLL10 C1orf159 TMEM88B SLC35E2B TNFRSF18 CDK11B LOC107985729 MIB2 SSU72 MIR6859-1 CCNL2 TNFRSF4 MIR6723 LOC101928626 LOC105378947 SCNN1D KLHL17 SAMD11 MTND1P23 VWA1 ACAP3
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss SDF4 MIR6726 SCNN1D ACAP3 FAM132A B3GALT6 UBE2J2
dgv25n54 Chr.1:1290683 - 1306366 on Build GRCh38 Loss MIR6726 SCNN1D ACAP3
nsv544947 Chr.1:1070426 - 1306704 on Build GRCh38 Loss MIR6726 MIR429 SCNN1D TNFRSF18 FAM132A B3GALT6 RNF223 SDF4 MIR200A TTLL10 C1orf159 ACAP3 TTLL10-AS1 TNFRSF4 LINC01342 MIR200B UBE2J2
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication MIR6726 MIR429 TNFRSF18 FAM132A LOC105378948 PUSL1 LOC100288175 CPSF3L SDF4 MIR200A TNFRSF4 LINC01342 CPTP MIR6727 SCNN1D B3GALT6 AGRN RNF223 TTLL10 C1orf159 TAS1R3 ACAP3 TTLL10-AS1 MIR200B UBE2J2
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion PUSL1 CPSF3L MIR6726 CPTP MXRA8 MIR6727 MIR6808 SCNN1D DVL1 TAS1R3 AURKAIP1 ACAP3
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss MIR6726 MIR429 FAM87B MMP23A FAM132A PLEKHN1 LOC105378948 PUSL1 LOC148413 LOC100288175 CPSF3L SDF4 LOC284600 MIR200A LOC100130417 MIR6808 LINC00115 LINC01128 FAM41C ATAD3B MIR6727 FNDC10 MMP23B B3GALT6 CDK11A LOC100288069 LOC100287934 TTLL10 C1orf159 TMEM240 TMEM88B SLC35E2B TTLL10-AS1 ANKRD65 MXRA8 TNFRSF18 LOC102724312 CDK11B LOC107985729 HES4 MIB2 ATAD3A SSU72 DVL1 AURKAIP1 CCNL2 TNFRSF4 LINC01342 PERM1 CPTP NOC2L SCNN1D MRPL20 KLHL17 AGRN SLC35E2 SAMD11 ATAD3C RNF223 LOC107985728 NADK ISG15 VWA1 TAS1R3 ACAP3 MIR200B UBE2J2
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion ANKRD65 MIR6726 MXRA8 MIR429 TNFRSF18 LOC102724312 CDK11B LOC107985729 FAM132A MIB2 ATAD3A PUSL1 LOC148413 SSU72 CPSF3L SDF4 MIR200A MIR6808 DVL1 AURKAIP1 CCNL2 TNFRSF4 LINC01342 CPTP ATAD3B MIR6727 SCNN1D FNDC10 MMP23B MRPL20 B3GALT6 ATAD3C VWA1 TTLL10 C1orf159 TMEM240 TAS1R3 ACAP3 TMEM88B TTLL10-AS1 MIR200B UBE2J2
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain PUSL1 CPSF3L MIR6726 CPTP MXRA8 MIR6727 MIR6808 SCNN1D DVL1 TAS1R3 ACAP3
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss MIR6726 CPTP MXRA8 MIR6727 SCNN1D PUSL1 CPSF3L MIR6808 DVL1 TAS1R3 AURKAIP1 ACAP3 UBE2J2
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain ANKRD65 MIR6726 MXRA8 MIR429 TNFRSF18 FAM132A PLEKHN1 LOC105378948 HES4 PUSL1 LOC148413 LOC100288175 CPSF3L SDF4 LOC284600 MIR200A LOC100130417 MIR6808 DVL1 AURKAIP1 CCNL2 TNFRSF4 LINC01342 PERM1 CPTP NOC2L MIR6727 SCNN1D MRPL20 KLHL17 B3GALT6 AGRN SAMD11 RNF223 LOC107985728 ISG15 TTLL10 C1orf159 TAS1R3 ACAP3 TMEM88B TTLL10-AS1 MIR200B UBE2J2
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR6726 MIR429 MIR6727 SCNN1D TNFRSF18 FAM132A B3GALT6 PUSL1 CPSF3L SDF4 MIR200A TTLL10 ACAP3 TTLL10-AS1 TNFRSF4 MIR200B UBE2J2

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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