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See other ACAP3 CNV Assays ›
Gene Symbol
ACAP3
Assay Reference Genome
Location

Chr.1:1293588 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00899971_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 116983

Gene Name:

 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3

Gene Aliases:

 CENTB5

Location:

 Chr.1:1292384-1307925 on Build GRCh38

Assay Gene Location:

 Within Exon 25
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ACAP3 NM_030649.2 24 2555 NP_085152.2
XM_005244715.2 23 2492 XP_005244772.1
XM_005244717.3 12 1549 XP_005244774.1
XM_011540606.2 24 2604 XP_011538908.1
XM_011540607.1 24 5028 XP_011538909.1
XM_011540608.2 23 2509 XP_011538910.1
XM_011540609.2 23 2506 XP_011538911.1
XM_017000233.1 24 2744 XP_016855722.1
AB051503.1 22 4121 BAB21807.1
AF411981.1 AAL04165.1
AK093954.1 BAC04257.1
BC004874.2 9 1159 AAH04874.2
BC021851.1 7 945 AAH21851.1
BC029929.1 4 358 AAH29929.1
BC051194.1 24 2555 AAH51194.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv817616 Chr.1:1257135 - 1306704 on Build GRCh38 Loss SCNN1D MIR6726 UBE2J2 ACAP3
nsv544965 Chr.1:1217251 - 1306704 on Build GRCh38 Loss SCNN1D B3GALT6 MIR6726 UBE2J2 ACAP3 SDF4 FAM132A
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss ATAD3C DVL1 LOC107985728 LOC100288175 ATAD3A MMP23A LOC148413 ISG15 LOC100134822 SDF4 TTLL10-AS1 LOC100130417 ANKRD65 LOC100133331 MIR200A UBE2J2 FAM41C CCNL2 LOC105378592 LOC100287934 MORN1 LOC107984841 ACAP3 MIR6727 SCNN1D LOC100288069 LOC105378589 CPTP SKI FAAP20 FNDC10 C1orf159 CDK11A LOC105378947 MIR6859-1 MTND1P23 FAM132A NOC2L SLC35E2 GABRD MRPL20 VWA1 HES4 MIB2 LOC105378948 OR4F29 FAM87B LOC100132287 MIR200B MIR1302-2 LINC00115 OR4F5 AURKAIP1 LOC105378949 FAM138A SAMD11 TNFRSF18 CALML6 DDX11L1 CDK11B KLHL17 LOC101928626 PLEKHN1 OR4F16 TTLL10 LINC01128 LOC100129534 SLC35E2B WASH7P TMEM240 TMEM88B MIR6859-2 LOC100506504 MIR6723 LOC107985729 LOC105378591 PRKCZ PUSL1 CFAP74 B3GALT6 LOC284600 LINC01342 MXRA8 TNFRSF4 ATAD3B SSU72 MTND2P28 MIR6808 MIR429 LOC102724312 GNB1 AGRN CPSF3L MMP23B RNF223 TAS1R3 LOC729737 LOC102725121 TMEM52 PERM1 MIR6726 NADK
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss MIR6727 SCNN1D PUSL1 CPSF3L DVL1 MIR6726 AURKAIP1 ACAP3 CPTP MIR6808 TAS1R3 MXRA8
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss MIR6727 SCNN1D PUSL1 MIR200B B3GALT6 DVL1 LINC01342 AURKAIP1 CPTP MXRA8 TNFRSF4 C1orf159 TNFRSF18 SDF4 TTLL10-AS1 MIR6808 FAM132A MIR429 TTLL10 CPSF3L MIR200A UBE2J2 RNF223 TAS1R3 MIR6726 ACAP3
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion MIR6727 SCNN1D PUSL1 CPSF3L DVL1 MIR6726 AURKAIP1 ACAP3 CPTP MIR6808 TAS1R3 MXRA8
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication MIR6727 SCNN1D PUSL1 MIR200B B3GALT6 LINC01342 CPTP LOC100288175 TNFRSF4 C1orf159 TNFRSF18 SDF4 TTLL10-AS1 FAM132A MIR429 TTLL10 AGRN CPSF3L MIR200A UBE2J2 RNF223 TAS1R3 LOC105378948 MIR6726 ACAP3
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss FAM87B MIR200B ATAD3C DVL1 LINC00115 AURKAIP1 LOC107985728 LOC100288175 SAMD11 TNFRSF18 ATAD3A MMP23A LOC148413 ISG15 SDF4 CDK11B TTLL10-AS1 KLHL17 PLEKHN1 TTLL10 LOC100130417 ANKRD65 LINC01128 MIR200A UBE2J2 FAM41C SLC35E2B TMEM240 TMEM88B CCNL2 LOC100287934 ACAP3 LOC107985729 MIR6727 SCNN1D PUSL1 LOC100288069 B3GALT6 LOC284600 LINC01342 CPTP FNDC10 MXRA8 TNFRSF4 C1orf159 ATAD3B CDK11A SSU72 MIR6808 FAM132A MIR429 NOC2L SLC35E2 LOC102724312 AGRN CPSF3L MMP23B MRPL20 RNF223 VWA1 TAS1R3 HES4 MIB2 PERM1 LOC105378948 MIR6726 NADK
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain MIR6727 SCNN1D PUSL1 CPSF3L DVL1 MIR6726 ACAP3 CPTP MIR6808 TAS1R3 MXRA8
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion MIR6727 SCNN1D PUSL1 MIR200B ATAD3C B3GALT6 DVL1 LINC01342 AURKAIP1 CPTP FNDC10 MXRA8 TNFRSF4 C1orf159 ATAD3B TNFRSF18 ATAD3A LOC148413 SSU72 SDF4 CDK11B TTLL10-AS1 MIR6808 FAM132A MIR429 LOC102724312 TTLL10 CPSF3L MMP23B ANKRD65 MIR200A MRPL20 UBE2J2 VWA1 TMEM240 TMEM88B TAS1R3 CCNL2 MIB2 MIR6726 ACAP3 LOC107985729
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss MIR6727 SCNN1D PUSL1 CPSF3L DVL1 AURKAIP1 UBE2J2 CPTP TAS1R3 MXRA8 MIR6726 ACAP3 MIR6808
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain MIR6727 SCNN1D PUSL1 MIR200B B3GALT6 DVL1 LOC284600 LINC01342 AURKAIP1 CPTP LOC107985728 LOC100288175 SAMD11 MXRA8 TNFRSF4 C1orf159 TNFRSF18 LOC148413 ISG15 SDF4 TTLL10-AS1 KLHL17 MIR6808 FAM132A MIR429 NOC2L PLEKHN1 TTLL10 LOC100130417 AGRN CPSF3L ANKRD65 MIR200A MRPL20 UBE2J2 RNF223 TMEM88B TAS1R3 CCNL2 HES4 PERM1 LOC105378948 MIR6726 ACAP3
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain MIR6727 MIR429 SCNN1D PUSL1 MIR200B TTLL10 B3GALT6 CPSF3L MIR200A UBE2J2 TNFRSF4 TNFRSF18 MIR6726 ACAP3 SDF4 TTLL10-AS1 FAM132A

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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