Hs00911984_cn

• Gene Symbol: NUBP2
• Assay Reference Genome Location: Chr.16:1787691 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 10101
• Gene Name: nucleotide binding protein 2
• Gene Aliases: CFD1, NBP 2, NUBP1
• Location: Chr.16:1782923-1789191 on Build GRCh38
• Assay Gene Location: Overlaps Intron 6 - Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NUBP2	NM_001284501.1			NP_001271430.1
	NM_001284502.1			NP_001271431.1
	NM_012225.3			NP_036357.1
	NR_104318.1
	XM_005255027.2			XP_005255084.1
	XM_005255030.1			XP_005255087.1
	XM_011522338.2			XP_011520640.1
	XM_017022831.1			XP_016878320.1
	XM_017022832.1			XP_016878321.1
	AF118394.1			AAD45242.1
	AK001023.1			BAA91471.1
	AK093593.1	2	1260
	AK300696.1
	AK315611.1
	BC002768.2			AAH02768.1
	BC008005.1			AAH08005.1
	BI196883.1
	BU189242.1
	BX446436.2
	BX648907.1	2	1215

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv457335	Chr.16:1729694 - 1789022 on Build GRCh38	Loss	NME3 MIR3177 MAPK8IP3 SPSB3 NUBP2 MRPS34 EME2
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	WDR24 FBXL16 DECR2 UNKL CCDC78 HAGH LOC107984876 AXIN1 ABCA17P JMJD8 MIR6767 NPRL3 STUB1 KCTD5 HS3ST6 TMEM204 MCRIP2 TSR3 MRPL28 EME2 MIR3177 SNORD60 C16orf59 TRAF7 RHBDL1 ABCA3 POLR3K NME4 TBL3 SOX8 RAB40C NTHL1 SNORA64 BAIAP3 ZNF598 MIR940 ERVK13-1 MIR6859-4 TPSD1 TPSB2 SNRNP25 HAGHL FLJ42627 NDUFB10 LOC105371049 PDIA2 SNORA10 TMEM8A SPSB3 PDPK1 CHTF18 MIR3677 HBA2 RNF151 LOC105371046 TELO2 MIR6768 NUBP2 MIR3176 RPUSD1 MIR3180-5 LOC105371184 PRR25 MIR4516 HN1L MIR662 HBQ1 NME3 RAB26 CCNF FAHD1 SSTR5-AS1 NTN3 MSRB1 LUC7L LMF1 LOC106660606 LOC105371045 PIGQ LOC105371038 MIR6511B1 MLST8 LOC101929280 PRSS27 SSTR5 HBZ RPL3L NARFL MPG TPSAB1 CACNA1H ARHGDIG LINC00254 LOC107987233 RHBDF1 LOC729652 MIR3178 GNG13 C16orf91 WASIR2 E4F1 METTL26 MEIOB SNORA78 IFT140 IGFALS MAPK8IP3 BRICD5 UBE2I ATP6V0C PGP SLC9A3R2 SYNGR3 HBA1 SNHG9 GNPTG LOC652276 LINC00235 CASKIN1 MIR1225 RGS11 NPW LOC100134368 FAM234A SNHG19 TPSG1 DNASE1L2 MRPS34 RPL23AP5 LOC100287175 LMF1-AS1 CAPN15 DDX11L10 PRR35 MSLN ECI1 PKD1 RHOT2 HBM PTX4 RPS2 CCDC154 GFER WDR90 NOXO1 RAB11FIP3 PRSS29P CEMP1 CLCN7 WFIKKN1 LOC105371047 NHLRC4 FAM173A C1QTNF8 METRN TBC1D24 MIR5587 MIR4717 CRAMP1 AMDHD2 TSC2 RNPS1
nsv571172	Chr.16:1764390 - 1817039 on Build GRCh38	Loss	NME3 IGFALS MAPK8IP3 SPSB3 NUBP2 MRPS34 HAGH EME2
nsv1160328	Chr.16:1704619 - 1797867 on Build GRCh38	Deletion	NME3 IGFALS MIR3177 MAPK8IP3 SPSB3 NUBP2 MRPS34 EME2
nsv571171	Chr.16:1757779 - 1804539 on Build GRCh38	Gain+Loss	NME3 IGFALS MAPK8IP3 SPSB3 NUBP2 MRPS34 EME2
nsv1042986	Chr.16:1784723 - 1866102 on Build GRCh38	Loss	IGFALS FAHD1 NUBP2 HAGH MEIOB
dgv4856n54	Chr.16:1600945 - 1813519 on Build GRCh38	Loss	NME3 MIR3177 SPSB3 HAGH LOC105371046 IFT140 IGFALS MAPK8IP3 NUBP2 MRPS34 CRAMP1 HN1L EME2
nsv471069	Chr.16:1754356 - 1791032 on Build GRCh38	Loss	NME3 IGFALS MAPK8IP3 SPSB3 NUBP2 MRPS34 EME2
nsv1051692	Chr.16:1505070 - 1866102 on Build GRCh38	Loss	NME3 FAHD1 MIR3177 SPSB3 HAGH MEIOB LOC105371046 IFT140 IGFALS TELO2 MAPK8IP3 NUBP2 MRPS34 CRAMP1 LOC105371047 TMEM204 HN1L EME2
nsv827500	Chr.16:1761258 - 1795126 on Build GRCh38	Gain	NME3 IGFALS MAPK8IP3 SPSB3 NUBP2 MRPS34 EME2
nsv518641	Chr.16:1645775 - 1835631 on Build GRCh38	Loss	NME3 FAHD1 MIR3177 SPSB3 HAGH MEIOB IGFALS MAPK8IP3 NUBP2 MRPS34 CRAMP1 HN1L EME2
nsv952900	Chr.16:1724500 - 1827999 on Build GRCh38	Deletion	NME3 IGFALS FAHD1 MIR3177 MAPK8IP3 SPSB3 NUBP2 MRPS34 HAGH EME2
nsv571170	Chr.16:1752231 - 1791032 on Build GRCh38	Loss	NME3 IGFALS MAPK8IP3 SPSB3 NUBP2 MRPS34 EME2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

iron-sulfur cluster assembly
cell projection organization

Function(s)

nucleotide binding
protein binding
ATP binding
metal ion binding
4 iron, 4 sulfur cluster binding