Hs00911984_cn

• Gene Symbol: NUBP2
• Assay Reference Genome Location: Chr.16:1787691 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 10101
• Gene Name: nucleotide binding protein 2
• Gene Aliases: CFD1, NBP 2, NUBP1
• Location: Chr.16:1782923-1789191 on Build GRCh38
• Assay Gene Location: Overlaps Intron 6 - Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NUBP2	NM_001284501.1			NP_001271430.1
	NM_001284502.1			NP_001271431.1
	NM_012225.3			NP_036357.1
	NR_104318.1
	XM_005255027.2			XP_005255084.1
	XM_005255030.1			XP_005255087.1
	XM_011522338.2			XP_011520640.1
	XM_017022831.1			XP_016878320.1
	XM_017022832.1			XP_016878321.1
	AF118394.1			AAD45242.1
	AK001023.1			BAA91471.1
	AK093593.1	2	1260
	AK300696.1
	AK315611.1
	BC002768.2			AAH02768.1
	BC008005.1			AAH08005.1
	BI196883.1
	BU189242.1
	BX446436.2
	BX648907.1	2	1215

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv571169	Chr.16:1729694 - 1789022 on Build GRCh38	Loss	EME2 MIR3177 NUBP2 SPSB3 MAPK8IP3 NME3 MRPS34
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	WASIR2 RHOT2 CEMP1 CACNA1H PRR25 MSRB1 ATP6V0C TSC2 CASKIN1 RAB11FIP3 UBE2I PRSS27 EME2 LOC105371184 MIR5587 DDX11L10 ABCA17P MIR3677 LOC652276 DNASE1L2 TBC1D24 LOC107984876 MIR1225 NPW SNRNP25 PRSS29P NTHL1 MIR940 CCDC154 JMJD8 TMEM8A BAIAP3 STUB1 ERVK13-1 FAM234A NME4 MLST8 PIGQ HBQ1 FAHD1 SNORD60 KCTD5 MIR3178 PDPK1 CAPN15 POLR3K CLCN7 MEIOB C16orf59 ARHGDIG RGS11 LOC729652 LMF1-AS1 HAGH TELO2 SPSB3 TSR3 RPS2 SNORA10 LINC00254 GNPTG METTL26 IGFALS MIR662 MIR3176 FAM173A UNKL TBL3 LOC105371045 TPSAB1 LOC105371038 MRPS34 RNF151 LOC106660606 LOC105371049 AXIN1 HBA1 HAGHL RAB40C LOC100134368 C16orf91 TMEM204 GFER LOC101929280 SNORA78 DECR2 WFIKKN1 WDR90 SSTR5-AS1 CRAMP1 MAPK8IP3 NME3 LINC00235 SOX8 TPSD1 IFT140 RPL3L NOXO1 LOC107987233 LOC105371047 MSLN HBM SNHG9 SYNGR3 RPUSD1 TPSB2 ECI1 MIR6511B1 AMDHD2 RAB26 HN1L SLC9A3R2 HS3ST6 TPSG1 CCNF PKD1 LOC105371046 PDIA2 SNHG19 RPL23AP5 NARFL NDUFB10 HBZ LOC100287175 MCRIP2 METRN NPRL3 RHBDF1 MRPL28 WDR24 HBA2 MIR6767 MIR4516 CHTF18 PTX4 MIR3177 FBXL16 PGP RHBDL1 FLJ42627 NTN3 PRR35 MIR4717 LMF1 CCDC78 C1QTNF8 E4F1 TRAF7 BRICD5 RNPS1 MIR6768 MPG NHLRC4 NUBP2 LUC7L SNORA64 ZNF598 ABCA3 GNG13 SSTR5 MIR6859-4 MIR3180-5
nsv571172	Chr.16:1764390 - 1817039 on Build GRCh38	Loss	EME2 NUBP2 HAGH SPSB3 MAPK8IP3 NME3 MRPS34 IGFALS
nsv1160328	Chr.16:1704619 - 1797867 on Build GRCh38	Deletion	EME2 MIR3177 NUBP2 SPSB3 MAPK8IP3 NME3 MRPS34 IGFALS
nsv571171	Chr.16:1757779 - 1804539 on Build GRCh38	Gain+Loss	EME2 NUBP2 SPSB3 MAPK8IP3 NME3 MRPS34 IGFALS
nsv1042986	Chr.16:1784723 - 1866102 on Build GRCh38	Loss	NUBP2 HAGH FAHD1 MEIOB IGFALS
dgv4856n54	Chr.16:1600945 - 1813519 on Build GRCh38	Loss	CRAMP1 MAPK8IP3 NME3 MRPS34 EME2 MIR3177 NUBP2 IFT140 HN1L HAGH SPSB3 LOC105371046 IGFALS
nsv471069	Chr.16:1754356 - 1791032 on Build GRCh38	Loss	EME2 NUBP2 SPSB3 MAPK8IP3 NME3 MRPS34 IGFALS
nsv1051692	Chr.16:1505070 - 1866102 on Build GRCh38	Loss	CRAMP1 MAPK8IP3 NME3 MRPS34 MEIOB EME2 MIR3177 NUBP2 IFT140 HN1L LOC105371047 HAGH TELO2 SPSB3 FAHD1 LOC105371046 TMEM204 IGFALS
nsv827500	Chr.16:1761258 - 1795126 on Build GRCh38	Gain	EME2 NUBP2 SPSB3 MAPK8IP3 NME3 MRPS34 IGFALS
nsv518641	Chr.16:1645775 - 1835631 on Build GRCh38	Loss	CRAMP1 MAPK8IP3 NME3 MRPS34 MEIOB EME2 MIR3177 NUBP2 HN1L HAGH SPSB3 FAHD1 IGFALS
nsv457336	Chr.16:1752231 - 1791032 on Build GRCh38	Loss	EME2 NUBP2 SPSB3 MAPK8IP3 NME3 MRPS34 IGFALS
nsv952900	Chr.16:1724500 - 1827999 on Build GRCh38	Deletion	EME2 MIR3177 NUBP2 HAGH SPSB3 MAPK8IP3 FAHD1 NME3 MRPS34 IGFALS

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

iron-sulfur cluster assembly
cell projection organization

Function(s)

nucleotide binding
protein binding
ATP binding
metal ion binding
4 iron, 4 sulfur cluster binding