Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 9328 |
Gene Name: | general transcription factor IIIC subunit 5 |
Gene Aliases: |
TFIIIC63, TFIIICepsilon, TFiiiC2-63 |
Location: |
Chr.9:133030675-133058503 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 4 - Exon 5 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| GTF3C5 | NM_001122823.1 | NP_001116295.1 | ||
| NM_001286709.1 | NP_001273638.1 | |||
| NM_012087.3 | NP_036219.2 | |||
| XM_005272234.3 | XP_005272291.1 | |||
| XM_011519201.1 | XP_011517503.1 | |||
| XM_017015315.1 | XP_016870804.1 | |||
| XM_017015316.1 | XP_016870805.1 | |||
| AF133124.1 | AAD41476.1 | |||
| AJ420443.1 | ||||
| AK000194.1 | BAA91001.1 | |||
| AK024510.1 | ||||
| AK055092.1 | ||||
| AK097295.1 | BAC04993.1 | |||
| AK225761.1 | ||||
| AK293980.1 | ||||
| AK311481.1 | ||||
| AY007123.1 | AAG01991.1 | |||
| BC009741.2 | AAH09741.2 | |||
| BC011355.1 | AAH11355.1 | |||
| BC017337.2 | AAH17337.1 | |||
| BC030157.2 | AAH30157.2 | |||
| BQ673969.1 |
Target Gene Details
Entrez Gene ID: | 102465528 |
Gene Name: | microRNA 6877 |
Gene Aliases: |
hsa-mir-6877 |
Location: |
Chr.9:133051996-133052059 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| MIR6877 | NR_106937.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| esv2739138 | Chr.9:132727483 - 135521553 on Build GRCh38 | Deletion |
 C9orf116
DBH-AS1
CACFD1
LCN1
SURF4
LOC100130548
SNORD24
LOC401557
GBGT1
SLC2A6
CEL
RPL7A
SURF1
MIR548AW
OLFM1
MIR3689C
RXRA
CELP
SURF6
LOC101928193
MIR3689B
ABO
TSC1
GTF3C5
FCN1
LOC101928525
C9orf62
MED22
COL5A1
SPACA9
LOC101448202
FCN2
STKLD1
MIR4669
SNORD36B
SARDH
LINC00094
RALGDS
MIR3689D2
OBP2B
MIR3689D1
SURF2
COL5A1-AS1
DBH
WDR5
MRPS2
MIR3689E
LOC100996574
BRD3
AK8
VAV2
SNORD36C
FAM163B
ADAMTSL2
RNU6ATAC
SNORD36A
PPP1R26-AS1
MIR3689F
ADAMTS13
TMEM8C
SNORD141A
PPP1R26
MIR6877
GFI1B
LOC105376306
MIR3689A
REXO4
|
| nsv466606 | Chr.9:133030314 - 133080285 on Build GRCh38 | Loss |
LOC105376306
CEL
MIR6877
LOC100996574
GTF3C5
|
| nsv6746 | Chr.9:133044293 - 133068877 on Build GRCh38 | Insertion |
CEL
MIR6877
LOC100996574
GTF3C5
|
| nsv831744 | Chr.9:132980050 - 133174043 on Build GRCh38 | Gain+Loss |
LOC105376306
GBGT1
SNORD141A
CEL
RALGDS
MIR6877
LOC100996574
GFI1B
CELP
GTF3C5
|
| nsv508564 | Chr.9:133013830 - 133073076 on Build GRCh38 | Deletion |
LOC105376306
SNORD141A
CEL
MIR6877
LOC100996574
GTF3C5
|
Back To TopMore Information
Set Membership: |
Intragenic
Non-exonic
DGV Variation
|
Panther Classification:
Molecular Function -
RNA metabolism protein
nucleic acid metabolism protein
general transcription factor
Gene Ontology Categories:
Back To Top