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See other PAOX CNV Assays ›
Gene Symbol
PAOX
Assay Reference Genome
Location

Chr.10:133381614 on build GRCh38
Cytoband
10q26.3
Assay ID Hs00919174_cn
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 196743

Gene Name:

 polyamine oxidase (exo-N4-amino)

Gene Aliases:

 PAO

Location:

 Chr.10:133379237-133391696 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PAOX NM_152911.3 3 903 NP_690875.1
NM_207127.2 3 903 NP_997010.1
NM_207128.2 3 903 NP_997011.1
NR_109763.1 3 903
NR_109764.1 2 416
NR_109765.1 2 416
NR_109766.1 2 416
AF226657.1 2 643 AAN40706.1
AF312698.1 3 949 AAO63265.1
AK124186.1
AK128001.1 3 787
AL834535.1 1 148 CAD39191.1
AY358418.1 3 843 AAQ88784.1
AY541513.1 3 853 AAS64373.1
AY541514.1 2 366 AAS64374.1
AY541515.1 3 853 AAS64375.1
AY541516.1 3 879 AAS64376.1
AY541517.1 2 365 AAS64377.1
AY541518.1 2 366 AAS64378.1
AY541519.1 3 853 AAS64379.1
AY541521.1 AAS64381.1
AY541522.1 AAS64382.1
AY541523.1 AAS64383.1
AY541524.1 4 753 AAS64384.1
BC032778.1 3 914 AAH32778.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759793 Chr.10:133030918 - 133619181 on Build GRCh38 Gain+Loss CALY SYCE1 TUBGCP2 KNDC1 VENTX CYP2E1 ECHS1 SPRN SCART1 UTF1 ZNF511 MIR202 PRAP1 MTG1 ADGRA1-AS1 ADGRA1 MIR3944 PAOX MIR202HG FUOM SPRNP1 ADAM8
nsv470980 Chr.10:133186655 - 133409514 on Build GRCh38 Loss CALY TUBGCP2 KNDC1 VENTX ECHS1 UTF1 ZNF511 MIR202 PRAP1 MTG1 MIR3944 PAOX MIR202HG FUOM ADAM8
nsv952707 Chr.10:133333097 - 133403896 on Build GRCh38 Deletion ECHS1 CALY PRAP1 MTG1 MIR3944 PAOX FUOM
nsv428243 Chr.10:133245214 - 133767422 on Build GRCh38 Gain CALY SYCE1 TUBGCP2 CYP2E1 ECHS1 SPRN SCART1 ZNF511 MIR202 FRG2B PRAP1 MTG1 MIR3944 PAOX MIR202HG FUOM SPRNP1 ADAM8
nsv552644 Chr.10:133328068 - 133402966 on Build GRCh38 Loss ECHS1 CALY PRAP1 MTG1 MIR3944 PAOX FUOM
nsv470981 Chr.10:133365107 - 133620799 on Build GRCh38 Gain ECHS1 SPRN SCART1 SYCE1 MTG1 MIR3944 PAOX SPRNP1 CYP2E1
dgv2e196 Chr.10:133189913 - 133450541 on Build GRCh38 Duplication CALY TUBGCP2 KNDC1 VENTX ECHS1 SPRN UTF1 ZNF511 MIR202 PRAP1 MTG1 MIR3944 PAOX MIR202HG FUOM ADAM8
dgv35e55 Chr.10:133370615 - 133621047 on Build GRCh38 Gain ECHS1 SPRN SCART1 SYCE1 MTG1 MIR3944 PAOX SPRNP1 CYP2E1
nsv1052904 Chr.10:133298340 - 133769367 on Build GRCh38 Gain CALY SYCE1 TUBGCP2 CYP2E1 ECHS1 SPRN SCART1 ZNF511 FRG2B PRAP1 MTG1 MIR3944 PAOX FUOM SPRNP1
nsv1037772 Chr.10:133263092 - 133403671 on Build GRCh38 Gain ECHS1 CALY ZNF511 TUBGCP2 PRAP1 MTG1 MIR3944 PAOX FUOM ADAM8
nsv528260 Chr.10:132859348 - 133620799 on Build GRCh38 Loss CALY TUBGCP2 ECHS1 SPRN SCART1 LINC01168 PRAP1 MTG1 ADGRA1-AS1 ADGRA1 CFAP46 FUOM SPRNP1 ADAM8 SYCE1 KNDC1 VENTX CYP2E1 LINC01166 UTF1 ZNF511 MIR202 MIR3944 LINC01167 PAOX MIR202HG
esv2750853 Chr.10:133266358 - 133621047 on Build GRCh38 Gain CALY SYCE1 TUBGCP2 CYP2E1 ECHS1 SPRN SCART1 ZNF511 PRAP1 MTG1 MIR3944 PAOX FUOM SPRNP1 ADAM8
nsv527785 Chr.10:133344451 - 133402966 on Build GRCh38 Loss ECHS1 PRAP1 MTG1 MIR3944 PAOX FUOM
dgv3e196 Chr.10:133266297 - 133450541 on Build GRCh38 Duplication ECHS1 CALY SPRN ZNF511 TUBGCP2 PRAP1 MTG1 MIR3944 PAOX FUOM ADAM8
nsv832040 Chr.10:133301560 - 133412641 on Build GRCh38 Loss ECHS1 CALY ZNF511 TUBGCP2 PRAP1 MTG1 MIR3944 PAOX FUOM
nsv552589 Chr.10:133257500 - 133563944 on Build GRCh38 Gain CALY SYCE1 TUBGCP2 CYP2E1 ECHS1 SPRN SCART1 ZNF511 PRAP1 MTG1 MIR3944 PAOX FUOM ADAM8

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More Information


Additional Information:

For this assay, SNP(s) [rs78367010] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

oxidase

Gene Ontology Categories:

Function(s) Process(es)


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