Hs00921305_cn

• Gene Symbol: ABCA9
• Assay Reference Genome Location: Chr.17:69016307 on build GRCh38
• Cytoband: 17q24.2

Target Gene Details

• Entrez Gene ID: 10350
• Gene Name: ATP binding cassette subfamily A member 9
• Gene Aliases: EST640918
• Location: Chr.17:68974632-69078978 on Build GRCh38
• Assay Gene Location: Within Exon 25

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ABCA9	NM_080283.3	22	3128	NP_525022.2
	XM_017024011.1	22	3093	XP_016879500.1
	XM_017024012.1	22	3197	XP_016879501.1
	XM_017024013.1	22	3017	XP_016879502.1
	XM_017024014.1	22	3617	XP_016879503.1
	XM_017024015.1	19	2640	XP_016879504.1
	AF423307.1	21	2985	AAN32751.1
	AY028899.1	22	3128	AAK30024.1
	CR627382.1	21	2934	CAH10479.1

Target Gene Details

• Entrez Gene ID: 104355297
• Gene Name: ABCA9 antisense RNA 1
• Gene Aliases: -
• Location: Chr.17:69004714-69018323 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ABCA9-AS1	NR_126414.1
	DA128020.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833526	Chr.17:68984617 - 69140893 on Build GRCh38	Gain	ABCA9 MIR4524A MIR4524B ABCA6 ABCA9-AS1

More Information

Additional Information:

For this assay, SNP(s) [rs73370041] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

ATP-binding cassette (ABC) transporter, primary active transporter, transporter

Gene Ontology Categories:

Process(es)

lipid transport
transmembrane transport

Function(s)

ATP binding
ATPase activity, coupled to transmembrane movement of substances