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Gene Symbol
PUSL1
Assay Reference Genome
Location

Chr.1:1309711 on build GRCh38
Cytoband
1p36.33
Assay ID Hs00934037_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126789

Gene Name:

 pseudouridylate synthase-like 1

Gene Aliases:

 -

Location:

 Chr.1:1308562-1311677 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PUSL1 NM_153339.1 NP_699170.1
XM_005244720.3 XP_005244777.1
AK027721.1 2 598
AK075292.1 BAC11527.1
AK298218.1
BC034304.1 AAH34304.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv482937 Chr.1:10001 - 2368561 on Build GRCh38 Loss FAAP20 B3GALT6 LINC01342 MIR200A SLC35E2 SKI GABRD MIB2 AURKAIP1 OR4F29 C1orf159 PLEKHN1 MIR429 WASH7P HES4 FAM87B TNFRSF4 SDF4 OR4F5 ATAD3C ANKRD65 CCNL2 CPTP ATAD3B AGRN LOC107985728 LOC100132287 LOC100287934 LOC102725121 TMEM52 LOC148413 MMP23A MIR200B ACAP3 SAMD11 SSU72 TMEM240 MTND2P28 ATAD3A NADK LOC105378948 KLHL17 TNFRSF18 SCNN1D LOC102724312 LOC105378949 LOC284600 LOC105378947 LOC100133331 RNF223 TMEM88B PERM1 FNDC10 DDX11L1 LINC00115 LOC100130417 LOC100288175 PRKCZ LOC107984841 LOC107985729 CALML6 CDK11B TTLL10 OR4F16 CFAP74 MORN1 LINC01128 MXRA8 LOC105378592 GNB1 MIR6808 MIR6859-1 FAM41C LOC100134822 FAM132A LOC105378589 MIR6859-2 PUSL1 MIR6727 TAS1R3 LOC100129534 LOC100288069 LOC100506504 CPSF3L UBE2J2 FAM138A SLC35E2B NOC2L LOC729737 MTND1P23 LOC105378591 MIR1302-2 LOC101928626 ISG15 MMP23B CDK11A DVL1 MIR6723 MRPL20 MIR6726 TTLL10-AS1 VWA1
nsv544971 Chr.1:1294063 - 1351426 on Build GRCh38 Loss ACAP3 PUSL1 CPSF3L MIR6727 MIR6726 MIR6808 TAS1R3 DVL1 CPTP
nsv544969 Chr.1:1290683 - 1374597 on Build GRCh38 Loss AURKAIP1 ACAP3 PUSL1 CPSF3L MIR6727 SCNN1D MIR6726 MIR6808 TAS1R3 DVL1 CPTP MXRA8
dgv7n100 Chr.1:1306835 - 1379057 on Build GRCh38 Loss AURKAIP1 ACAP3 PUSL1 CPSF3L MIR6727 MIR6808 TAS1R3 DVL1 CPTP MXRA8
nsv470680 Chr.1:1070426 - 1378635 on Build GRCh38 Loss FAM132A PUSL1 MIR6727 B3GALT6 RNF223 TAS1R3 LINC01342 MIR200A CPSF3L UBE2J2 MIR200B AURKAIP1 TTLL10 ACAP3 DVL1 C1orf159 MXRA8 MIR429 TNFRSF18 TNFRSF4 SDF4 SCNN1D MIR6726 TTLL10-AS1 MIR6808 CPTP
dgv6n100 Chr.1:1301750 - 1362354 on Build GRCh38 Gain+Loss ACAP3 PUSL1 CPSF3L MIR6727 MIR6808 TAS1R3 DVL1 CPTP MXRA8
nsv1160772 Chr.1:1027585 - 1333467 on Build GRCh38 Duplication FAM132A PUSL1 MIR6727 B3GALT6 RNF223 AGRN TAS1R3 LINC01342 MIR200A LOC100288175 CPSF3L UBE2J2 MIR200B TTLL10 ACAP3 C1orf159 MIR429 LOC105378948 TNFRSF18 TNFRSF4 SDF4 SCNN1D MIR6726 TTLL10-AS1 CPTP
nsv1160788 Chr.1:1282706 - 1376336 on Build GRCh38 Deletion AURKAIP1 ACAP3 PUSL1 CPSF3L MIR6727 SCNN1D MIR6726 MIR6808 TAS1R3 DVL1 CPTP MXRA8
nsv10161 Chr.1:776731 - 1777210 on Build GRCh38 Gain+Loss LOC284600 B3GALT6 RNF223 TMEM88B PERM1 FNDC10 LINC01342 LINC00115 MIR200A SLC35E2 LOC100130417 LOC100288175 MIB2 LOC107985729 CDK11B AURKAIP1 TTLL10 C1orf159 LINC01128 MXRA8 PLEKHN1 MIR429 HES4 FAM87B TNFRSF4 SDF4 ATAD3C ANKRD65 CCNL2 MIR6808 CPTP FAM41C FAM132A PUSL1 MIR6727 ATAD3B AGRN LOC107985728 TAS1R3 LOC100288069 LOC100287934 CPSF3L UBE2J2 SLC35E2B LOC148413 MMP23A MIR200B NOC2L ACAP3 SAMD11 SSU72 TMEM240 ISG15 MMP23B CDK11A DVL1 MRPL20 ATAD3A NADK LOC105378948 KLHL17 TNFRSF18 SCNN1D MIR6726 TTLL10-AS1 LOC102724312 VWA1
esv3890636 Chr.1:1304555 - 1353203 on Build GRCh38 Loss ACAP3 PUSL1 CPSF3L MIR6727 MIR6808 TAS1R3 DVL1 CPTP MXRA8
nsv950452 Chr.1:1106921 - 1637538 on Build GRCh38 Deletion FAM132A PUSL1 MIR6727 B3GALT6 ATAD3B TMEM88B TAS1R3 FNDC10 LINC01342 MIR200A CPSF3L UBE2J2 MIB2 LOC148413 LOC107985729 CDK11B MIR200B AURKAIP1 TTLL10 ACAP3 SSU72 TMEM240 MMP23B DVL1 C1orf159 MXRA8 MIR429 MRPL20 ATAD3A TNFRSF18 TNFRSF4 SDF4 SCNN1D ATAD3C ANKRD65 MIR6726 CCNL2 TTLL10-AS1 MIR6808 LOC102724312 VWA1 CPTP
nsv1000169 Chr.1:1281678 - 1362354 on Build GRCh38 Gain ACAP3 PUSL1 CPSF3L MIR6727 SCNN1D MIR6726 MIR6808 TAS1R3 DVL1 CPTP MXRA8
esv2758912 Chr.1:1263940 - 1384492 on Build GRCh38 Loss AURKAIP1 ACAP3 PUSL1 MIR6727 TAS1R3 DVL1 MXRA8 CPSF3L SCNN1D UBE2J2 MIR6726 MIR6808 CPTP
dgv2n67 Chr.1:877618 - 1426500 on Build GRCh38 Gain LOC284600 FAM132A PUSL1 MIR6727 B3GALT6 RNF223 AGRN TMEM88B LOC107985728 TAS1R3 PERM1 LINC01342 MIR200A LOC100130417 LOC100288175 CPSF3L UBE2J2 LOC148413 MIR200B NOC2L AURKAIP1 TTLL10 ACAP3 SAMD11 ISG15 DVL1 C1orf159 MXRA8 PLEKHN1 MIR429 HES4 MRPL20 LOC105378948 KLHL17 TNFRSF18 TNFRSF4 SDF4 SCNN1D ANKRD65 MIR6726 CCNL2 TTLL10-AS1 MIR6808 CPTP
nsv469848 Chr.1:1146082 - 1322235 on Build GRCh38 Gain FAM132A MIR200B TTLL10 ACAP3 PUSL1 MIR6727 B3GALT6 MIR200A MIR429 TNFRSF18 TNFRSF4 SDF4 CPSF3L SCNN1D UBE2J2 MIR6726 TTLL10-AS1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

lyase

Gene Ontology Categories:

Function(s) Process(es)


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