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See other DHX16 CNV Assays ›
Gene Symbol
DHX16
Assay Reference Genome
Location

Chr.6:30670429 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00975785_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8449

Gene Name:

 DEAH-box helicase 16

Gene Aliases:

 DBP2, DDX16, PRO2014, PRP8, PRPF2, Prp2

Location:

 Chr.6:30653119-30673053 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DHX16 NM_001164239.1 NP_001157711.1
NM_003587.4 NP_003578.2
XM_011514940.2 XP_011513242.1
AB001601.1 BAA25908.1
AK302721.1
AK312264.1
BC008825.2 AAH08825.1
BC009392.2 AAH09392.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss MDC1-AS1 HCG20 PPP1R18 IER3 MRPS18B ABCF1 C6orf136 MDC1 FLOT1 NRM PPP1R10 TUBB DHX16 ATAT1
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion OR5V1 LINC00243 RNF39 MIR877 OR11A1 OR2H2 RPP21 MDC1 LOC105375014 PPP1R10 ZNRD1 DDR1 HLA-J TUBB ZNRD1ASP C6orf15 OR2H1 GTF2H4 PSORS1C1 HLA-F ATAT1 HCG8 MUC22 HCG4B TRIM15 LOC101929006 OR2J2 IER3 MICA TRIM39-RPP21 HLA-A HCG27 POU5F1 HLA-H MIR6891 HLA-L SNORD32B MAS1L MOG GNL1 HCG18 PSORS1C2 PRR3 TRIM31 VARS2 PPP1R18 PPP1R11 ABCF1 IFITM4P C6orf136 LINC01015 LOC554223 PSORS1C3 OR14J1 GABBR1 HLA-E TRIM40 DHX16 TCF19 HLA-K TRIM39 HCG4 CDSN MDC1-AS1 OR12D2 CCHCR1 HCG17 OR10C1 ZFP57 HCG20 UBD HLA-C MRPS18B OR12D3 HCG22 FLOT1 HLA-B NRM HLA-G HLA-F-AS1 TRIM31-AS1 DPCR1 MIR4640 HCG9 TRIM10 MUC21 TRIM26 SFTA2
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss LINC00243 GNL1 MIR877 PSORS1C2 PRR3 VARS2 PPP1R18 ABCF1 C6orf136 MDC1 LOC105375014 PPP1R10 DDR1 PSORS1C3 TUBB C6orf15 HLA-E GTF2H4 PSORS1C1 DHX16 TCF19 ATAT1 CDSN MDC1-AS1 MUC22 CCHCR1 HCG20 IER3 HLA-C MRPS18B HCG22 FLOT1 NRM DPCR1 MIR4640 HCG27 POU5F1 MUC21 SFTA2
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion OR5V1 LINC00243 RNF39 MIR877 OR11A1 OR2H2 RPP21 MDC1 LOC105375014 PPP1R10 ZNRD1 DDR1 LINC01623 LINC01556 HLA-J TUBB ZNRD1ASP C6orf15 OR2H1 GTF2H4 PSORS1C1 HLA-F ATAT1 HCG8 MUC22 HCG4B TRIM15 LOC101929006 OR2J2 HCG16 IER3 TRIM39-RPP21 HLA-A HCG27 POU5F1 HLA-H HLA-L SNORD32B MAS1L MOG LOC100129636 GNL1 HCG18 PSORS1C2 PRR3 TRIM31 VARS2 PPP1R18 PPP1R11 ABCF1 IFITM4P C6orf136 ZNF311 LINC01015 OR2J3 LOC554223 PSORS1C3 OR14J1 GABBR1 OR2W1 HLA-E TRIM40 DHX16 TCF19 TRIM27 HLA-K TRIM39 HCG4 CDSN MDC1-AS1 OR12D2 CCHCR1 HCG17 OR10C1 ZFP57 HCG20 UBD MRPS18B OR12D3 HCG22 FLOT1 NRM HLA-G HLA-F-AS1 OR2B3 TRIM31-AS1 DPCR1 LINC00533 MIR4640 HCG9 TRIM10 MUC21 TRIM26 HCG14 SFTA2
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion LINC00243 RNF39 MIR877 RPP21 MDC1 LOC105375014 PPP1R10 ZNRD1 DDR1 HLA-J TUBB ZNRD1ASP C6orf15 GTF2H4 PSORS1C1 HLA-F ATAT1 HCG8 MUC22 HCG4B TRIM15 IER3 TRIM39-RPP21 HLA-A HCG27 POU5F1 HLA-H HLA-L GNL1 HCG18 PSORS1C2 PRR3 TRIM31 VARS2 PPP1R18 PPP1R11 ABCF1 IFITM4P C6orf136 LOC554223 PSORS1C3 HLA-E TRIM40 DHX16 TCF19 HLA-K TRIM39 HCG4 CDSN MDC1-AS1 CCHCR1 HCG17 HCG20 HLA-C MRPS18B HCG22 FLOT1 NRM HLA-G HLA-F-AS1 TRIM31-AS1 DPCR1 MIR4640 HCG9 TRIM10 MUC21 TRIM26 SFTA2
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion LINC00243 GNL1 MIR877 PSORS1C2 PRR3 VARS2 PPP1R18 ABCF1 C6orf136 MDC1 LOC105375014 PPP1R10 DDR1 PSORS1C3 TUBB C6orf15 HLA-E GTF2H4 PSORS1C1 DHX16 TCF19 ATAT1 CDSN MDC1-AS1 MUC22 CCHCR1 HCG20 IER3 HLA-C MRPS18B HCG22 FLOT1 NRM DPCR1 MIR4640 HCG27 POU5F1 MUC21 SFTA2
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss LINC00243 RNF39 MIR877 RPP21 MDC1 LOC105375014 PPP1R10 ZNRD1 DDR1 HLA-J TUBB ZNRD1ASP C6orf15 GTF2H4 PSORS1C1 ATAT1 HCG8 MUC22 HCG4B TRIM15 IER3 TRIM39-RPP21 HLA-A HCG27 POU5F1 HLA-H HLA-L GNL1 HCG18 PSORS1C2 PRR3 TRIM31 VARS2 PPP1R18 PPP1R11 ABCF1 C6orf136 PSORS1C3 HLA-E TRIM40 DHX16 TCF19 HLA-K TRIM39 CDSN MDC1-AS1 CCHCR1 HCG17 HCG20 HLA-C MRPS18B HCG22 FLOT1 NRM TRIM31-AS1 DPCR1 MIR4640 HCG9 TRIM10 MUC21 TRIM26 SFTA2
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion LINC00243 GNL1 MIR877 PRR3 VARS2 PPP1R18 ABCF1 C6orf136 MDC1 LOC105375014 PPP1R10 DDR1 TUBB GTF2H4 DHX16 ATAT1 MDC1-AS1 MUC22 HCG20 IER3 MRPS18B HCG22 FLOT1 NRM DPCR1 MIR4640 MUC21 SFTA2
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication LINC00243 RNF39 MIR877 RPP21 MDC1 LOC105375014 PPP1R10 HCG26 ZNRD1 DDR1 HLA-J TUBB ZNRD1ASP C6orf15 HCP5 GTF2H4 PSORS1C1 ATAT1 HCG8 MUC22 TRIM15 IER3 MICA TRIM39-RPP21 HCG27 POU5F1 MIR6891 HLA-L GNL1 HCG18 PSORS1C2 PRR3 TRIM31 VARS2 PPP1R18 PPP1R11 ABCF1 C6orf136 PSORS1C3 HLA-E TRIM40 DHX16 TCF19 TRIM39 CDSN MDC1-AS1 CCHCR1 HCG17 LOC102725068 HCG20 HLA-C MRPS18B HCG22 FLOT1 HLA-B NRM TRIM31-AS1 DPCR1 MIR4640 TRIM10 MUC21 TRIM26 SFTA2

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

RNA helicase

Gene Ontology Categories:

Function(s) Process(es)


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