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See other DHX16 CNV Assays ›
Gene Symbol
DHX16
Assay Reference Genome
Location

Chr.6:30670429 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00975785_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 8449

Gene Name:

 DEAH-box helicase 16

Gene Aliases:

 DBP2, DDX16, PRO2014, PRP8, PRPF2, Prp2

Location:

 Chr.6:30653119-30673053 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Intron 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
DHX16 NM_001164239.1 NP_001157711.1
NM_003587.4 NP_003578.2
XM_011514940.2 XP_011513242.1
AB001601.1 BAA25908.1
AK302721.1
AK312264.1
BC008825.2 AAH08825.1
BC009392.2 AAH09392.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion OR5V1 PPP1R11 C6orf15 RNF39 SNORD32B CCHCR1 MUC21 LINC00243 LOC101929006 DPCR1 NRM TRIM40 MDC1-AS1 HLA-J VARS2 MUC22 SFTA2 IFITM4P HLA-H MIR877 CDSN TRIM26 PPP1R10 IER3 HLA-L POU5F1 ATAT1 HLA-C OR2H1 HLA-F-AS1 ZNRD1 HCG17 DHX16 HLA-K HCG22 TCF19 C6orf136 TRIM31-AS1 GABBR1 MRPS18B PRR3 FLOT1 MICA MIR4640 HCG4 OR10C1 HCG18 LOC554223 PSORS1C1 PSORS1C2 OR12D2 HLA-F OR2H2 HCG9 OR14J1 GTF2H4 OR2J2 DDR1 HCG8 HCG4B PSORS1C3 HLA-B OR11A1 MOG TRIM10 TRIM15 HLA-A LOC105375014 ZNRD1ASP MAS1L OR12D3 ABCF1 HLA-G MDC1 LINC01015 HLA-E ZFP57 HCG20 PPP1R18 TUBB TRIM31 HCG27 TRIM39-RPP21 MIR6891 TRIM39 GNL1 UBD RPP21
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss NRM MDC1-AS1 DHX16 ABCF1 MDC1 HCG20 PPP1R18 C6orf136 TUBB MRPS18B PPP1R10 IER3 FLOT1 ATAT1
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss C6orf15 CCHCR1 MUC21 LINC00243 MIR4640 DPCR1 NRM PSORS1C1 MDC1-AS1 VARS2 PSORS1C2 MUC22 SFTA2 MIR877 CDSN GTF2H4 DDR1 PPP1R10 IER3 PSORS1C3 POU5F1 ATAT1 HLA-C LOC105375014 DHX16 ABCF1 MDC1 HLA-E HCG20 HCG22 PPP1R18 TCF19 C6orf136 TUBB HCG27 MRPS18B PRR3 GNL1 FLOT1
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion OR5V1 HCG16 PPP1R11 C6orf15 RNF39 SNORD32B CCHCR1 MUC21 LINC00243 LOC101929006 DPCR1 NRM TRIM40 MDC1-AS1 HLA-J VARS2 MUC22 SFTA2 IFITM4P LINC00533 HLA-H MIR877 CDSN TRIM26 PPP1R10 IER3 HLA-L POU5F1 ATAT1 OR2H1 ZNF311 HLA-F-AS1 ZNRD1 HCG14 OR2W1 HCG17 DHX16 HLA-K HCG22 TCF19 C6orf136 OR2B3 TRIM31-AS1 GABBR1 MRPS18B PRR3 FLOT1 TRIM27 MIR4640 HCG4 OR10C1 HCG18 LOC554223 PSORS1C1 PSORS1C2 OR12D2 LINC01556 HLA-F OR2H2 HCG9 OR14J1 GTF2H4 OR2J2 DDR1 HCG8 HCG4B PSORS1C3 OR11A1 MOG TRIM10 TRIM15 HLA-A LOC105375014 LOC100129636 ZNRD1ASP MAS1L OR12D3 ABCF1 HLA-G OR2J3 MDC1 LINC01015 HLA-E ZFP57 LINC01623 HCG20 PPP1R18 TUBB TRIM31 HCG27 TRIM39-RPP21 TRIM39 GNL1 UBD RPP21
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion PPP1R11 C6orf15 RNF39 CCHCR1 MUC21 LINC00243 DPCR1 NRM TRIM40 MDC1-AS1 HLA-J VARS2 MUC22 SFTA2 IFITM4P HLA-H MIR877 CDSN TRIM26 PPP1R10 IER3 HLA-L POU5F1 ATAT1 HLA-C HLA-F-AS1 ZNRD1 HCG17 DHX16 HLA-K HCG22 TCF19 C6orf136 TRIM31-AS1 MRPS18B PRR3 FLOT1 MIR4640 HCG4 HCG18 LOC554223 PSORS1C1 PSORS1C2 HLA-F HCG9 GTF2H4 DDR1 HCG8 HCG4B PSORS1C3 TRIM10 TRIM15 HLA-A LOC105375014 ZNRD1ASP ABCF1 HLA-G MDC1 HLA-E HCG20 PPP1R18 TUBB TRIM31 HCG27 TRIM39-RPP21 TRIM39 GNL1 RPP21
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss PPP1R11 C6orf15 RNF39 CCHCR1 MUC21 LINC00243 DPCR1 NRM TRIM40 MDC1-AS1 HLA-J VARS2 MUC22 SFTA2 HLA-H MIR877 CDSN TRIM26 PPP1R10 IER3 HLA-L POU5F1 ATAT1 HLA-C ZNRD1 HCG17 DHX16 HLA-K HCG22 TCF19 C6orf136 TRIM31-AS1 MRPS18B PRR3 FLOT1 MIR4640 HCG18 PSORS1C1 PSORS1C2 HCG9 GTF2H4 DDR1 HCG8 HCG4B PSORS1C3 TRIM10 TRIM15 HLA-A LOC105375014 ZNRD1ASP ABCF1 MDC1 HLA-E HCG20 PPP1R18 TUBB TRIM31 HCG27 TRIM39-RPP21 TRIM39 GNL1 RPP21
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion C6orf15 CCHCR1 MUC21 LINC00243 MIR4640 DPCR1 NRM PSORS1C1 MDC1-AS1 VARS2 PSORS1C2 MUC22 SFTA2 MIR877 CDSN GTF2H4 DDR1 PPP1R10 IER3 PSORS1C3 POU5F1 ATAT1 HLA-C LOC105375014 DHX16 ABCF1 MDC1 HLA-E HCG20 HCG22 PPP1R18 TCF19 C6orf136 TUBB HCG27 MRPS18B PRR3 GNL1 FLOT1
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion MUC21 LINC00243 MIR4640 DPCR1 NRM MDC1-AS1 VARS2 MUC22 SFTA2 MIR877 GTF2H4 DDR1 PPP1R10 IER3 ATAT1 LOC105375014 DHX16 ABCF1 MDC1 HCG20 HCG22 PPP1R18 C6orf136 TUBB MRPS18B PRR3 GNL1 FLOT1
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication PPP1R11 C6orf15 RNF39 CCHCR1 MUC21 LINC00243 DPCR1 NRM TRIM40 MDC1-AS1 HLA-J VARS2 MUC22 SFTA2 MIR877 CDSN TRIM26 PPP1R10 IER3 HLA-L POU5F1 ATAT1 HLA-C LOC102725068 ZNRD1 HCG17 DHX16 HCG22 TCF19 C6orf136 TRIM31-AS1 MRPS18B PRR3 FLOT1 MICA HCP5 MIR4640 HCG18 PSORS1C1 PSORS1C2 GTF2H4 DDR1 HCG8 PSORS1C3 HLA-B TRIM10 TRIM15 LOC105375014 ZNRD1ASP ABCF1 MDC1 HLA-E HCG20 PPP1R18 HCG26 TUBB TRIM31 HCG27 TRIM39-RPP21 MIR6891 TRIM39 GNL1 RPP21

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

RNA helicase

Gene Ontology Categories:

Function(s) Process(es)


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