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See other GTF2H4 CNV Assays ›
Gene Symbol
GTF2H4
Assay Reference Genome
Location

Chr.6:30913133 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00982074_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 2968

Gene Name:

 general transcription factor IIH subunit 4

Gene Aliases:

 P52, TFB2, TFIIH

Location:

 Chr.6:30908200-30914103 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 11 - Intron 12
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GTF2H4 NM_001517.4 NP_001508.1
AK222607.1 BAD96327.1
AK298058.1
BC004935.1 AAH04935.1
BC016302.2 AAH16302.1
BT007321.1 AAP35985.1
Y07595.1 CAA68870.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion HLA-B TRIM31 GNL1 PRR3 GTF2H4 OR5V1 LOC101929006 UBD HCG17 TRIM10 HCG4 OR2J2 HLA-C DHX16 PSORS1C3 TUBB HLA-K RPP21 MUC21 TRIM31-AS1 HLA-J HCG18 ATAT1 HCG8 TRIM15 PSORS1C2 MRPS18B C6orf15 OR12D3 LOC554223 ABCF1 PPP1R18 HCG4B SNORD32B CDSN HCG20 OR2H2 PSORS1C1 ZNRD1 IFITM4P MDC1-AS1 MIR877 LOC105375014 PPP1R10 MDC1 RNF39 GABBR1 FLOT1 ZNRD1ASP SFTA2 ZFP57 HLA-A MIR4640 C6orf136 TRIM39-RPP21 MIR6891 NRM HCG9 MAS1L TRIM26 VARS2 OR10C1 MOG OR11A1 CCHCR1 TRIM39 TCF19 PPP1R11 HLA-G POU5F1 OR12D2 OR2H1 HLA-F TRIM40 DDR1 HCG22 HLA-H HLA-L IER3 MICA MUC22 HCG27 HLA-F-AS1 LINC01015 LINC00243 HLA-E OR14J1 DPCR1
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss PSORS1C1 MDC1-AS1 MIR877 LOC105375014 PPP1R10 MDC1 GNL1 PRR3 GTF2H4 FLOT1 SFTA2 MIR4640 C6orf136 NRM HLA-C VARS2 DHX16 PSORS1C3 TUBB MUC21 CCHCR1 TCF19 ATAT1 POU5F1 PSORS1C2 MRPS18B C6orf15 DDR1 ABCF1 HCG22 PPP1R18 IER3 MUC22 HCG27 CDSN LINC00243 HLA-E DPCR1 HCG20
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion LOC100129636 LINC01623 OR2W1 TRIM31 TRIM27 GNL1 PRR3 GTF2H4 OR5V1 HCG16 LOC101929006 UBD HCG17 LINC01556 TRIM10 HCG4 OR2J2 DHX16 PSORS1C3 TUBB HLA-K RPP21 MUC21 TRIM31-AS1 HLA-J HCG18 ATAT1 HCG8 TRIM15 PSORS1C2 MRPS18B C6orf15 OR12D3 LOC554223 ABCF1 PPP1R18 HCG4B OR2J3 SNORD32B OR2B3 CDSN HCG20 OR2H2 PSORS1C1 ZNRD1 IFITM4P MDC1-AS1 MIR877 LOC105375014 PPP1R10 MDC1 RNF39 GABBR1 FLOT1 ZNRD1ASP SFTA2 ZFP57 HLA-A MIR4640 C6orf136 ZNF311 TRIM39-RPP21 NRM HCG9 MAS1L TRIM26 VARS2 LINC00533 OR10C1 MOG HCG14 OR11A1 CCHCR1 TRIM39 TCF19 PPP1R11 HLA-G POU5F1 OR12D2 OR2H1 HLA-F TRIM40 DDR1 HCG22 HLA-H HLA-L IER3 MUC22 HCG27 HLA-F-AS1 LINC01015 LINC00243 HLA-E OR14J1 DPCR1
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion TRIM31 GNL1 PRR3 GTF2H4 HCG17 TRIM10 HCG4 HLA-C DHX16 PSORS1C3 TUBB HLA-K RPP21 MUC21 TRIM31-AS1 HLA-J HCG18 ATAT1 HCG8 TRIM15 PSORS1C2 MRPS18B C6orf15 LOC554223 ABCF1 PPP1R18 HCG4B CDSN HCG20 PSORS1C1 ZNRD1 IFITM4P MDC1-AS1 MIR877 LOC105375014 PPP1R10 MDC1 RNF39 FLOT1 ZNRD1ASP SFTA2 HLA-A MIR4640 C6orf136 TRIM39-RPP21 NRM HCG9 TRIM26 VARS2 CCHCR1 TRIM39 TCF19 PPP1R11 HLA-G POU5F1 HLA-F TRIM40 DDR1 HCG22 HLA-H HLA-L IER3 MUC22 HCG27 HLA-F-AS1 LINC00243 HLA-E DPCR1
esv3608518 Chr.6:30889700 - 30987504 on Build GRCh38 Gain GTF2H4 VARS2 SFTA2 MUC21 DDR1 DPCR1 MIR4640
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss TRIM31 GNL1 PRR3 GTF2H4 HCG17 TRIM10 HLA-C DHX16 PSORS1C3 TUBB HLA-K RPP21 MUC21 TRIM31-AS1 HLA-J HCG18 ATAT1 HCG8 TRIM15 PSORS1C2 MRPS18B C6orf15 ABCF1 PPP1R18 HCG4B CDSN HCG20 PSORS1C1 ZNRD1 MDC1-AS1 MIR877 LOC105375014 PPP1R10 MDC1 RNF39 FLOT1 ZNRD1ASP SFTA2 HLA-A MIR4640 C6orf136 TRIM39-RPP21 NRM HCG9 TRIM26 VARS2 CCHCR1 TRIM39 TCF19 PPP1R11 POU5F1 TRIM40 DDR1 HCG22 HLA-H HLA-L IER3 MUC22 HCG27 LINC00243 HLA-E DPCR1
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion PSORS1C1 MDC1-AS1 MIR877 LOC105375014 PPP1R10 MDC1 GNL1 PRR3 GTF2H4 FLOT1 SFTA2 MIR4640 C6orf136 NRM HLA-C VARS2 DHX16 PSORS1C3 TUBB MUC21 CCHCR1 TCF19 ATAT1 POU5F1 PSORS1C2 MRPS18B C6orf15 DDR1 ABCF1 HCG22 PPP1R18 IER3 MUC22 HCG27 CDSN LINC00243 HLA-E DPCR1 HCG20
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion MDC1-AS1 MIR877 LOC105375014 PPP1R10 MDC1 GNL1 PRR3 GTF2H4 FLOT1 SFTA2 MIR4640 C6orf136 NRM VARS2 DHX16 TUBB MUC21 ATAT1 MRPS18B DDR1 ABCF1 HCG22 PPP1R18 IER3 MUC22 LINC00243 DPCR1 HCG20
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication HLA-B TRIM31 GNL1 PRR3 GTF2H4 HCG26 HCG17 HCP5 TRIM10 HLA-C DHX16 PSORS1C3 TUBB RPP21 MUC21 TRIM31-AS1 HLA-J HCG18 ATAT1 HCG8 TRIM15 PSORS1C2 MRPS18B C6orf15 ABCF1 PPP1R18 CDSN LOC102725068 HCG20 PSORS1C1 ZNRD1 MDC1-AS1 MIR877 LOC105375014 PPP1R10 MDC1 RNF39 FLOT1 ZNRD1ASP SFTA2 MIR4640 C6orf136 TRIM39-RPP21 MIR6891 NRM TRIM26 VARS2 CCHCR1 TRIM39 TCF19 PPP1R11 POU5F1 TRIM40 DDR1 HCG22 HLA-L IER3 MICA MUC22 HCG27 LINC00243 HLA-E DPCR1
nsv525438 Chr.6:30897052 - 30966198 on Build GRCh38 Gain GTF2H4 VARS2 SFTA2 DDR1 DPCR1
nsv1031677 Chr.6:30889765 - 31005088 on Build GRCh38 Gain GTF2H4 VARS2 SFTA2 MUC21 DDR1 DPCR1 MIR4640

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