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See other CHTF18 CNV Assays ›
Gene Symbol
CHTF18
Assay Reference Genome
Location

Chr.16:795695 on build GRCh38
Cytoband
16p13.3
Assay ID Hs00988285_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 63922

Gene Name:

 chromosome transmission fidelity factor 18

Gene Aliases:

 C16orf41, C321D2.2, C321D2.3, C321D2.4, CHL12, Ctf18, RUVBL

Location:

 Chr.16:788622-798074 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 15 - Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHTF18 NM_022092.2 NP_071375.1
XM_005255470.1 XP_005255527.1
XM_005255471.3 XP_005255528.1
XM_011522572.1 XP_011520874.1
XM_011522573.1 XP_011520875.1
XM_017023532.1 XP_016879021.1
XM_017023533.1 XP_016879022.1
XM_017023534.1 XP_016879023.1
AK024476.1 BAB15766.1
AK128869.1
BC006278.2 AAH06278.2
BC006437.1 AAH06437.1
BC018184.1 AAH18184.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4828n54 Chr.16:760143 - 828324 on Build GRCh38 Gain CHTF18 RPUSD1 MSLN GNG13 MIR662 PRR25
esv3637582 Chr.16:751057 - 851536 on Build GRCh38 Gain CHTF18 RPUSD1 MSLN GNG13 MIR662 PRR25
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication RHBDL1 MRPS34 LOC100134368 MIR4516 IFT140 SSTR5 WDR24 TBL3 HN1L MIR3180-5 SNHG19 NTHL1 DDX11L10 RGS11 MIR662 MEIOB PRR25 NARFL MIR1225 HBQ1 LUC7L LOC100287175 PDPK1 TSC2 LOC105371047 C16orf91 LOC106660606 SNORA10 UNKL MIR3177 WDR90 HBZ MSLN NPRL3 LOC107984876 NTN3 MAPK8IP3 SNORA64 PTX4 LOC105371045 RAB40C CRAMP1 PRSS29P SYNGR3 TPSD1 MRPL28 MLST8 DNASE1L2 TPSG1 MIR4717 LOC105371046 STUB1 SNORA78 MCRIP2 ABCA3 SNRNP25 FLJ42627 TBC1D24 CAPN15 NOXO1 ERVK13-1 TMEM204 SLC9A3R2 MIR5587 LMF1-AS1 RNF151 ATP6V0C ECI1 HS3ST6 TRAF7 MIR6767 CASKIN1 LOC105371049 HBA2 AXIN1 MIR6768 UBE2I BAIAP3 LOC105371038 TELO2 BRICD5 LOC729652 JMJD8 CCDC154 LINC00235 ABCA17P RAB11FIP3 EME2 WASIR2 RPS2 MSRB1 IGFALS PIGQ FAM173A RHBDF1 CCNF NME4 FAHD1 METRN GNPTG NDUFB10 SNORD60 MIR3677 PRR35 MIR940 ARHGDIG NPW TPSB2 HBM PRSS27 LOC107987233 RPUSD1 C1QTNF8 TPSAB1 SNHG9 FAM234A MPG CACNA1H MIR3176 CCDC78 MIR6859-4 E4F1 WFIKKN1 HBA1 TSR3 MIR6511B1 NUBP2 ZNF598 RAB26 RPL3L FBXL16 LOC652276 CHTF18 LOC105371184 RNPS1 DECR2 HAGH GNG13 RHOT2 LINC00254 NME3 KCTD5 C16orf59 SSTR5-AS1 CEMP1 GFER RPL23AP5 SPSB3 NHLRC4 LOC101929280 MIR3178 PDIA2 LMF1 POLR3K HAGHL METTL26 AMDHD2 TMEM8A SOX8 PGP PKD1 CLCN7
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss LOC107987233 RPUSD1 RHBDL1 MIR5587 RAB40C MIR3176 CCDC78 WDR24 WFIKKN1 LOC105371038 JMJD8 MIR662 LINC00235 FBXL16 PRR25 RAB11FIP3 CHTF18 NARFL LOC105371184 GNG13 RHOT2 STUB1 LOC100287175 PIGQ FAM173A NHLRC4 MCRIP2 LOC101929280 WDR90 MSLN METRN HAGHL METTL26 PRR35 CAPN15
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss LOC107987233 RPUSD1 RHBDL1 MIR5587 RAB40C MIR3176 CCDC78 WDR24 WFIKKN1 LOC105371038 JMJD8 MIR662 LINC00235 FBXL16 PRR25 RAB11FIP3 CHTF18 NARFL LOC105371184 GNG13 RHOT2 STUB1 LOC100287175 PIGQ FAM173A NHLRC4 MCRIP2 LOC101929280 WDR90 MSLN METRN HAGHL METTL26 PRR35 CAPN15
esv3570042 Chr.16:793849 - 822928 on Build GRCh38 Gain CHTF18 GNG13 PRR25
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LOC107987233 RPUSD1 RHBDL1 MIR5587 LMF1-AS1 C1QTNF8 SSTR5 RAB40C MIR3176 CCDC78 WDR24 WFIKKN1 LOC105371038 JMJD8 MIR662 LINC00235 FBXL16 PRR25 RAB11FIP3 CHTF18 NARFL LOC105371184 GNG13 RHOT2 SSTR5-AS1 STUB1 LOC100287175 PIGQ FAM173A NHLRC4 MCRIP2 LOC101929280 WDR90 LMF1 MSLN METRN HAGHL METTL26 SOX8 LOC107984876 PRR35 CAPN15
nsv571042 Chr.16:785298 - 847566 on Build GRCh38 Loss CHTF18 RPUSD1 GNG13 PRR25
nsv571044 Chr.16:790409 - 796798 on Build GRCh38 Loss CHTF18
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication RPUSD1 RHBDL1 RAB40C CCDC78 WDR24 WFIKKN1 LOC105371038 JMJD8 MIR662 FBXL16 CHTF18 NARFL LOC105371184 GNG13 RHOT2 STUB1 LOC100287175 PIGQ FAM173A MCRIP2 LOC101929280 WDR90 MSLN METRN HAGHL METTL26
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication LOC107987233 RPUSD1 RHBDL1 MIR5587 RAB40C MIR3176 CCDC78 WDR24 WFIKKN1 LOC105371038 JMJD8 MIR662 LINC00235 FBXL16 PRR25 RAB11FIP3 CHTF18 NARFL LOC105371184 GNG13 RHOT2 STUB1 LOC100287175 PIGQ FAM173A NHLRC4 MCRIP2 LOC101929280 WDR90 MSLN METRN HAGHL METTL26 PRR35 CAPN15
nsv571043 Chr.16:787857 - 798755 on Build GRCh38 Loss CHTF18 RPUSD1 GNG13
nsv817712 Chr.16:774098 - 810673 on Build GRCh38 Loss CHTF18 RPUSD1 GNG13 PRR25
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss CHTF18 NARFL LOC105371184 RPUSD1 RHBDL1 GNG13 RHOT2 STUB1 LOC100287175 FAM173A MCRIP2 CCDC78 WDR24 WDR90 MSLN LOC105371038 METRN HAGHL JMJD8 MIR662 FBXL16
nsv571045 Chr.16:790597 - 847566 on Build GRCh38 Gain CHTF18 GNG13 PRR25
nsv457312 Chr.16:760039 - 797743 on Build GRCh38 Loss CHTF18 RPUSD1 MSLN MIR662

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