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See other ATAT1 CNV Assays ›
Gene Symbol
ATAT1
Assay Reference Genome
Location

Chr.6:30643065 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00994026_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 79969

Gene Name:

 alpha tubulin acetyltransferase 1

Gene Aliases:

 C6orf134, MEC17, Nbla00487, TAT, alpha-TAT, alpha-TAT1

Location:

 Chr.6:30626842-30646823 on Build GRCh38

Assay Gene Location:

 Within Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATAT1 NM_001031722.3 NP_001026892.1
NM_001190724.2 9 1235 NP_001177653.1
NM_001254952.2 NP_001241881.1
NM_001318762.1 9 997 NP_001305691.1
NM_001318763.1 10 1066 NP_001305692.1
NM_024909.3 NP_079185.2
NR_033823.2
XM_005249415.2 XP_005249472.1
XM_011514918.2 XP_011513220.1
XM_017011316.1 XP_016866805.1
AB075512.1 BAE45758.1
AK023220.1 10 1032 BAB14472.1
AK225107.1
AK297661.1 9 1118
AK298743.1
AL833858.1 CAD38717.1
BC006105.1 9 1008 AAH06105.1
BC025755.1 AAH25755.1
BC047303.1 AAH47303.1
BX442806.2
CX786272.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss C6orf136 MDC1-AS1 PPP1R10 DHX16 ABCF1 MDC1 IER3 TUBB PPP1R18 ATAT1 NRM FLOT1 HCG20 MRPS18B
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion ZNRD1ASP HCG27 TRIM15 PSORS1C2 MIR4640 HCG9 HLA-A CDSN HLA-F-AS1 CCHCR1 FLOT1 TRIM26 MUC21 OR12D2 TRIM39 C6orf136 DPCR1 LOC105375014 LINC00243 RPP21 OR10C1 OR5V1 PRR3 ZNRD1 MDC1 LOC101929006 HLA-B GNL1 HCG22 IER3 NRM HLA-J LOC554223 DDR1 MDC1-AS1 OR2H1 PPP1R10 DHX16 ZFP57 ABCF1 LINC01015 TRIM40 HLA-H MUC22 UBD TRIM31-AS1 MICA SNORD32B TUBB TRIM39-RPP21 TCF19 HCG8 PSORS1C3 SFTA2 HLA-C MRPS18B PPP1R11 HLA-L GABBR1 MIR6891 OR12D3 C6orf15 HCG4 MOG HCG18 TRIM31 OR2H2 VARS2 HLA-K HCG17 RNF39 IFITM4P OR2J2 OR11A1 MIR877 PSORS1C1 MAS1L HLA-E GTF2H4 PPP1R18 OR14J1 ATAT1 HLA-G HCG4B TRIM10 HCG20 POU5F1 HLA-F
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss DDR1 MDC1-AS1 PPP1R10 DHX16 HCG27 ABCF1 PSORS1C2 MIR4640 MUC22 TUBB TCF19 CDSN CCHCR1 FLOT1 PSORS1C3 SFTA2 MUC21 HLA-C MRPS18B C6orf136 C6orf15 DPCR1 LOC105375014 LINC00243 VARS2 PRR3 MIR877 MDC1 GNL1 PSORS1C1 HCG22 IER3 HLA-E GTF2H4 PPP1R18 ATAT1 NRM HCG20 POU5F1
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion ZNRD1ASP HCG27 TRIM15 PSORS1C2 TRIM27 MIR4640 HCG9 HLA-A CDSN HLA-F-AS1 CCHCR1 FLOT1 TRIM26 MUC21 OR12D2 TRIM39 C6orf136 DPCR1 OR2B3 LOC105375014 LINC00243 RPP21 LINC01556 OR10C1 OR5V1 PRR3 ZNRD1 HCG16 MDC1 LOC101929006 GNL1 HCG22 IER3 NRM LOC100129636 OR2J3 HCG14 HLA-J LOC554223 DDR1 MDC1-AS1 ZNF311 OR2H1 PPP1R10 DHX16 OR2W1 ZFP57 ABCF1 LINC01015 TRIM40 HLA-H MUC22 UBD TRIM31-AS1 SNORD32B TUBB TRIM39-RPP21 TCF19 HCG8 PSORS1C3 LINC01623 SFTA2 MRPS18B PPP1R11 HLA-L GABBR1 OR12D3 C6orf15 HCG4 MOG HCG18 TRIM31 OR2H2 VARS2 LINC00533 HLA-K HCG17 RNF39 IFITM4P OR2J2 OR11A1 MIR877 PSORS1C1 MAS1L HLA-E GTF2H4 PPP1R18 OR14J1 ATAT1 HLA-G HCG4B TRIM10 HCG20 POU5F1 HLA-F
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion ZNRD1ASP HCG27 TRIM15 PSORS1C2 MIR4640 HCG9 HLA-A CDSN HLA-F-AS1 CCHCR1 FLOT1 TRIM26 MUC21 TRIM39 C6orf136 DPCR1 LOC105375014 LINC00243 RPP21 PRR3 ZNRD1 MDC1 GNL1 HCG22 IER3 NRM HLA-J LOC554223 DDR1 MDC1-AS1 PPP1R10 DHX16 ABCF1 TRIM40 HLA-H MUC22 TRIM31-AS1 TUBB TRIM39-RPP21 TCF19 HCG8 PSORS1C3 SFTA2 HLA-C MRPS18B PPP1R11 HLA-L C6orf15 HCG4 HCG18 TRIM31 VARS2 HLA-K HCG17 RNF39 IFITM4P MIR877 PSORS1C1 HLA-E GTF2H4 PPP1R18 ATAT1 HLA-G HCG4B TRIM10 HCG20 POU5F1 HLA-F
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion DDR1 MDC1-AS1 PPP1R10 DHX16 HCG27 ABCF1 PSORS1C2 MIR4640 MUC22 TUBB TCF19 CDSN CCHCR1 FLOT1 PSORS1C3 SFTA2 MUC21 HLA-C MRPS18B C6orf136 C6orf15 DPCR1 LOC105375014 LINC00243 VARS2 PRR3 MIR877 MDC1 GNL1 PSORS1C1 HCG22 IER3 HLA-E GTF2H4 PPP1R18 ATAT1 NRM HCG20 POU5F1
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss ZNRD1ASP HCG27 TRIM15 PSORS1C2 MIR4640 HCG9 HLA-A CDSN CCHCR1 FLOT1 TRIM26 MUC21 TRIM39 C6orf136 DPCR1 LOC105375014 LINC00243 RPP21 PRR3 ZNRD1 MDC1 GNL1 HCG22 IER3 NRM HLA-J DDR1 MDC1-AS1 PPP1R10 DHX16 ABCF1 TRIM40 HLA-H MUC22 TRIM31-AS1 TUBB TRIM39-RPP21 TCF19 HCG8 PSORS1C3 SFTA2 HLA-C MRPS18B PPP1R11 HLA-L C6orf15 HCG18 TRIM31 VARS2 HLA-K HCG17 RNF39 MIR877 PSORS1C1 HLA-E GTF2H4 PPP1R18 ATAT1 HCG4B TRIM10 HCG20 POU5F1
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion DDR1 MDC1-AS1 PPP1R10 DHX16 ABCF1 MIR4640 MUC22 TUBB FLOT1 SFTA2 MUC21 MRPS18B C6orf136 DPCR1 LOC105375014 LINC00243 VARS2 PRR3 MIR877 MDC1 GNL1 HCG22 IER3 GTF2H4 PPP1R18 ATAT1 NRM HCG20
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication ZNRD1ASP HCG27 TRIM15 PSORS1C2 MIR4640 CDSN CCHCR1 FLOT1 TRIM26 MUC21 TRIM39 C6orf136 DPCR1 LOC105375014 LINC00243 RPP21 PRR3 ZNRD1 MDC1 HLA-B GNL1 HCG22 IER3 NRM HLA-J HCG26 DDR1 MDC1-AS1 PPP1R10 DHX16 ABCF1 TRIM40 MUC22 TRIM31-AS1 MICA TUBB TRIM39-RPP21 TCF19 HCG8 PSORS1C3 SFTA2 HLA-C MRPS18B PPP1R11 HLA-L MIR6891 C6orf15 HCG18 TRIM31 VARS2 HCG17 RNF39 LOC102725068 MIR877 PSORS1C1 HLA-E GTF2H4 HCP5 PPP1R18 ATAT1 TRIM10 HCG20 POU5F1

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