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See other ATAT1 CNV Assays ›
Gene Symbol
ATAT1
Assay Reference Genome
Location

Chr.6:30643065 on build GRCh38
Cytoband
6p21.33
Assay ID Hs00994026_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 79969

Gene Name:

 alpha tubulin acetyltransferase 1

Gene Aliases:

 C6orf134, MEC17, Nbla00487, TAT, alpha-TAT, alpha-TAT1

Location:

 Chr.6:30626842-30646823 on Build GRCh38

Assay Gene Location:

 Within Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATAT1 NM_001031722.3 NP_001026892.1
NM_001190724.2 9 1235 NP_001177653.1
NM_001254952.2 NP_001241881.1
NM_001318762.1 9 997 NP_001305691.1
NM_001318763.1 10 1066 NP_001305692.1
NM_024909.3 NP_079185.2
NR_033823.2
XM_005249415.2 XP_005249472.1
XM_011514918.2 XP_011513220.1
XM_017011316.1 XP_016866805.1
AB075512.1 BAE45758.1
AK023220.1 10 1032 BAB14472.1
AK225107.1
AK297661.1 9 1118
AK298743.1
AL833858.1 CAD38717.1
BC006105.1 9 1008 AAH06105.1
BC025755.1 AAH25755.1
BC047303.1 AAH47303.1
BX442806.2
CX786272.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion DDR1 TRIM31 GTF2H4 HLA-F-AS1 PPP1R10 C6orf136 LOC105375014 MIR6891 LOC101929006 OR5V1 HLA-A RPP21 HLA-J MUC22 SFTA2 LINC00243 OR12D3 HLA-K HCG4B HLA-G TRIM40 HLA-L IER3 RNF39 LINC01015 GNL1 CCHCR1 HLA-H ATAT1 HLA-C NRM VARS2 OR2J2 DHX16 HCG9 HCG17 C6orf15 MIR4640 POU5F1 TRIM31-AS1 MICA TUBB HLA-E LOC554223 OR12D2 OR2H1 PPP1R18 HLA-B OR14J1 HCG27 OR2H2 PSORS1C2 CDSN HCG22 HLA-F PSORS1C3 HCG20 ABCF1 MAS1L MDC1 TRIM26 OR11A1 IFITM4P TCF19 TRIM10 TRIM15 PPP1R11 MUC21 SNORD32B MDC1-AS1 TRIM39-RPP21 ZFP57 GABBR1 DPCR1 FLOT1 ZNRD1 OR10C1 HCG4 MIR877 MOG PSORS1C1 MRPS18B PRR3 UBD HCG18 TRIM39 ZNRD1ASP HCG8
nsv830626 Chr.6:30590287 - 30765128 on Build GRCh38 Loss PPP1R18 ATAT1 NRM PPP1R10 C6orf136 HCG20 ABCF1 FLOT1 MDC1 DHX16 MRPS18B TUBB IER3 MDC1-AS1
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss DDR1 HLA-E PPP1R18 GTF2H4 HCG27 PPP1R10 C6orf136 PSORS1C2 CDSN HCG22 LOC105375014 PSORS1C3 HCG20 ABCF1 MDC1 TCF19 MUC22 SFTA2 MUC21 LINC00243 IER3 MDC1-AS1 GNL1 CCHCR1 ATAT1 HLA-C NRM VARS2 DPCR1 FLOT1 DHX16 MIR877 C6orf15 MIR4640 POU5F1 PSORS1C1 MRPS18B PRR3 TUBB
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion DDR1 TRIM31 GTF2H4 HLA-F-AS1 PPP1R10 C6orf136 LOC105375014 HCG14 LOC101929006 OR5V1 HLA-A RPP21 OR2J3 HLA-J MUC22 SFTA2 LINC00243 OR12D3 HLA-K HCG4B HLA-G TRIM40 HLA-L IER3 RNF39 LINC01015 GNL1 CCHCR1 HLA-H ATAT1 NRM VARS2 OR2W1 OR2J2 DHX16 HCG9 HCG17 C6orf15 MIR4640 POU5F1 TRIM31-AS1 TUBB ZNF311 HLA-E LOC554223 OR12D2 LOC100129636 OR2H1 PPP1R18 OR14J1 HCG27 OR2H2 PSORS1C2 CDSN HCG22 HLA-F PSORS1C3 HCG20 ABCF1 MAS1L MDC1 TRIM26 OR11A1 IFITM4P TCF19 TRIM10 TRIM15 PPP1R11 MUC21 LINC01556 SNORD32B LINC00533 MDC1-AS1 HCG16 TRIM27 TRIM39-RPP21 ZFP57 OR2B3 GABBR1 DPCR1 FLOT1 ZNRD1 OR10C1 HCG4 MIR877 MOG PSORS1C1 MRPS18B PRR3 UBD HCG18 TRIM39 LINC01623 ZNRD1ASP HCG8
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion DDR1 TRIM31 GTF2H4 HLA-F-AS1 PPP1R10 C6orf136 LOC105375014 HLA-A RPP21 HLA-J MUC22 SFTA2 LINC00243 HLA-K HCG4B HLA-G TRIM40 HLA-L IER3 RNF39 GNL1 CCHCR1 HLA-H ATAT1 HLA-C NRM VARS2 DHX16 HCG9 HCG17 C6orf15 MIR4640 POU5F1 TRIM31-AS1 TUBB HLA-E LOC554223 PPP1R18 HCG27 PSORS1C2 CDSN HCG22 HLA-F PSORS1C3 HCG20 ABCF1 MDC1 TRIM26 IFITM4P TCF19 TRIM10 TRIM15 PPP1R11 MUC21 MDC1-AS1 TRIM39-RPP21 DPCR1 FLOT1 ZNRD1 HCG4 MIR877 PSORS1C1 MRPS18B PRR3 HCG18 TRIM39 ZNRD1ASP HCG8
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss DDR1 TRIM31 GTF2H4 PPP1R10 C6orf136 LOC105375014 HLA-A RPP21 HLA-J MUC22 SFTA2 LINC00243 HLA-K HCG4B TRIM40 HLA-L IER3 RNF39 GNL1 CCHCR1 HLA-H ATAT1 HLA-C NRM VARS2 DHX16 HCG9 HCG17 C6orf15 MIR4640 POU5F1 TRIM31-AS1 TUBB HLA-E PPP1R18 HCG27 PSORS1C2 CDSN HCG22 PSORS1C3 HCG20 ABCF1 MDC1 TRIM26 TCF19 TRIM10 TRIM15 PPP1R11 MUC21 MDC1-AS1 TRIM39-RPP21 DPCR1 FLOT1 ZNRD1 MIR877 PSORS1C1 MRPS18B PRR3 HCG18 TRIM39 ZNRD1ASP HCG8
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion DDR1 HLA-E PPP1R18 GTF2H4 HCG27 PPP1R10 C6orf136 PSORS1C2 CDSN HCG22 LOC105375014 PSORS1C3 HCG20 ABCF1 MDC1 TCF19 MUC22 SFTA2 MUC21 LINC00243 IER3 MDC1-AS1 GNL1 CCHCR1 ATAT1 HLA-C NRM VARS2 DPCR1 FLOT1 DHX16 MIR877 C6orf15 MIR4640 POU5F1 PSORS1C1 MRPS18B PRR3 TUBB
esv2670269 Chr.6:30498650 - 31067145 on Build GRCh38 Deletion DDR1 PPP1R18 GTF2H4 PPP1R10 C6orf136 HCG22 LOC105375014 HCG20 ABCF1 MDC1 MUC22 SFTA2 MUC21 LINC00243 IER3 MDC1-AS1 GNL1 ATAT1 NRM VARS2 DPCR1 FLOT1 DHX16 MIR877 MIR4640 MRPS18B PRR3 TUBB
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication DDR1 TRIM31 GTF2H4 PPP1R10 C6orf136 LOC105375014 MIR6891 RPP21 HLA-J MUC22 SFTA2 LINC00243 TRIM40 HLA-L IER3 RNF39 GNL1 CCHCR1 ATAT1 HLA-C NRM VARS2 HCP5 DHX16 HCG17 C6orf15 MIR4640 POU5F1 TRIM31-AS1 MICA LOC102725068 TUBB HCG26 HLA-E PPP1R18 HLA-B HCG27 PSORS1C2 CDSN HCG22 PSORS1C3 HCG20 ABCF1 MDC1 TRIM26 TCF19 TRIM10 TRIM15 PPP1R11 MUC21 MDC1-AS1 TRIM39-RPP21 DPCR1 FLOT1 ZNRD1 MIR877 PSORS1C1 MRPS18B PRR3 HCG18 TRIM39 ZNRD1ASP HCG8

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