Hs00994612_cn

• Gene Symbol: GTF3C2
• Assay Reference Genome Location: Chr.2:27336274 on build GRCh38
• Cytoband: 2p23.3

Target Gene Details

• Entrez Gene ID: 2976
• Gene Name: general transcription factor IIIC subunit 2
• Gene Aliases: TFIIIC-BETA, TFIIIC110
• Location: Chr.2:27325849-27357034 on Build GRCh38
• Assay Gene Location: Within Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GTF3C2	NM_001035521.2	8	1599	NP_001030598.1
	NM_001318909.1	8	1709	NP_001305838.1
	NM_001521.3	9	1675	NP_001512.1
	XM_005264272.4	9	1883	XP_005264329.1
	XM_011532801.2	9	2022	XP_011531103.1
	BC000212.2	9	1419	AAH00212.1
	BC020981.1	7	1308	AAH20981.1
	BT009799.1	7	1279	AAP88801.1
	BX647092.1	8	1709
	D13636.1	7	1318	BAA02800.1

Target Gene Details

• Entrez Gene ID: 100505624
• Gene Name: GTF3C2 antisense RNA 1
• Gene Aliases: -
• Location: Chr.2:27335542-27337803 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GTF3C2-AS1	NR_038427.1
	AK098715.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833614	Chr.2:27263559 - 27452213 on Build GRCh38	Gain	LOC105374363 KRTCAP3 EIF2B4 MPV17 IFT172 PPM1G SLC30A3 GTF3C2-AS1 FTH1P3 GTF3C2 ZNF513 DNAJC5G TRIM54 UCN SNX17 NRBP1
esv3575209	Chr.2:27334578 - 27389381 on Build GRCh38	Gain	GTF3C2-AS1 LOC105374363 EIF2B4 GTF3C2 ZNF513 PPM1G SNX17
nsv581244	Chr.2:27335385 - 27480628 on Build GRCh38	Loss	GTF3C2-AS1 LOC105374363 FTH1P3 KRTCAP3 EIF2B4 GTF3C2 ZNF513 IFT172 PPM1G SNX17 NRBP1
nsv2654	Chr.2:27309443 - 27336770 on Build GRCh38	Insertion	GTF3C2-AS1 MPV17 GTF3C2

More Information

• Set Membership: Intragenic, Exonic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
transcription from RNA polymerase III promoter
5S class rRNA transcription from RNA polymerase III type 1 promoter
tRNA transcription from RNA polymerase III promoter

Function(s)

DNA binding