Hs01011979_cn

• Gene Symbol: APOBEC3B
• Assay Reference Genome Location: Chr.22:38992635 on build GRCh38
• Cytoband: 22q13.1

Target Gene Details

• Entrez Gene ID: 9582
• Gene Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3B
• Gene Aliases: A3B, APOBEC1L, ARCD3, ARP4, DJ742C19.2, PHRBNL, bK150C2.2
• Location: Chr.22:38982399-38992779 on Build GRCh38
• Assay Gene Location: Within Exon 8

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
APOBEC3B	NM_001270411.1	8	1319	NP_001257340.1
	NM_004900.4	8	1394	NP_004891.4
	AK024854.1	7	1674
	BC053859.1	7	1266	AAH53859.1
	BX114955.1	3	432
	U61083.1	5	842	AAD00089.1
	U61084.1	8	1383	AAD00090.1

Target Gene Details

• Entrez Gene ID: 100874530
• Gene Name: APOBEC3B antisense RNA 1
• Gene Aliases: -
• Location: Chr.22:38991559-38998220 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
APOBEC3B-AS1	NR_104187.1
	CX754295.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv3627	Chr.22:38952080 - 39000579 on Build GRCh38	Deletion	APOBEC3A APOBEC3B-AS1 APOBEC3B
dgv770n67	Chr.22:38960228 - 38992577 on Build GRCh38	Loss	APOBEC3A APOBEC3B-AS1 APOBEC3B
nsv1056597	Chr.22:38950674 - 38993688 on Build GRCh38	Loss	APOBEC3A APOBEC3B-AS1 APOBEC3B
esv3568392	Chr.22:38954272 - 38993687 on Build GRCh38	Loss	APOBEC3A APOBEC3B-AS1 APOBEC3B
nsv198	Chr.22:38954302 - 39000579 on Build GRCh38	Deletion	APOBEC3A APOBEC3B-AS1 APOBEC3B
esv2495318	Chr.22:38961921 - 38993162 on Build GRCh38	Deletion	APOBEC3A APOBEC3B-AS1 APOBEC3B
esv33846	Chr.22:38963046 - 38995927 on Build GRCh38	Gain+Loss	APOBEC3A APOBEC3B-AS1 APOBEC3B
esv3584501	Chr.22:38967614 - 38993700 on Build GRCh38	Gain	APOBEC3B-AS1 APOBEC3B
dgv4571n100	Chr.22:38967602 - 39003295 on Build GRCh38	Loss	APOBEC3B-AS1 APOBEC3B
esv28999	Chr.22:38959802 - 38996495 on Build GRCh38	Loss	APOBEC3A APOBEC3B-AS1 APOBEC3B
esv2760711	Chr.22:38955461 - 39003307 on Build GRCh38	Loss	APOBEC3A APOBEC3B-AS1 APOBEC3B
dgv172n111	Chr.22:38947911 - 39007789 on Build GRCh38	Deletion	APOBEC3A APOBEC3B-AS1 APOBEC3B
nsv482077	Chr.22:38982400 - 38992778 on Build GRCh38	Gain	APOBEC3B-AS1 APOBEC3B
nsv9908	Chr.22:38990517 - 38995926 on Build GRCh38	Loss	APOBEC3B-AS1 APOBEC3B
dgv833e199	Chr.22:38960540 - 38993337 on Build GRCh38	Deletion	APOBEC3A APOBEC3B-AS1 APOBEC3B

More Information

• Set Membership: Intragenic, Exonic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA processing factor

Gene Ontology Categories:

Process(es)

negative regulation of transposition
innate immune response
defense response to virus

Function(s)

zinc ion binding
poly(A) RNA binding
deoxycytidine deaminase activity