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See other EME2 CNV Assays ›
Gene Symbol
EME2
Assay Reference Genome
Location

Chr.16:1775044 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01025647_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 197342

Gene Name:

 essential meiotic structure-specific endonuclease subunit 2

Gene Aliases:

 SLX2B, gs125

Location:

 Chr.16:1773222-1776714 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EME2 NM_001257370.1 NP_001244299.1
XM_017023025.1 XP_016878514.1
XM_017023026.1 XP_016878515.1
AK074080.2 BAB84906.2
EF452422.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571169 Chr.16:1729694 - 1789022 on Build GRCh38 Loss NUBP2 EME2 MRPS34 SPSB3 MIR3177 NME3 MAPK8IP3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication JMJD8 LMF1 MIR3176 CCDC154 LOC105371038 TRAF7 CRAMP1 CASKIN1 WDR24 RPL23AP5 AXIN1 CAPN15 RHOT2 MIR662 UBE2I LINC00254 RPUSD1 LOC107984876 HN1L DECR2 SNRNP25 BAIAP3 MIR3178 C16orf91 MIR6511B1 METRN LOC105371049 ABCA17P MLST8 KCTD5 NDUFB10 EME2 CCDC78 ECI1 PKD1 ERVK13-1 MIR3177 PGP CEMP1 TMEM204 WDR90 PTX4 HBA2 TSC2 MIR4516 BRICD5 SNORD60 MRPL28 FBXL16 NPW TPSD1 LOC105371047 ATP6V0C MRPS34 SLC9A3R2 RHBDF1 MSRB1 TPSB2 PRSS27 ARHGDIG DNASE1L2 SNORA10 NME4 SNHG9 PDIA2 SSTR5-AS1 C1QTNF8 NME3 TBC1D24 ZNF598 LMF1-AS1 WFIKKN1 SOX8 RNPS1 CLCN7 LOC100134368 GNPTG CCNF FAM173A MIR6767 TPSAB1 POLR3K CACNA1H HAGHL MIR1225 MIR4717 MIR5587 SNORA78 RAB40C NPRL3 LOC106660606 PIGQ HS3ST6 PRR25 AMDHD2 HBM UNKL CHTF18 SNORA64 PRR35 MIR940 GFER RPL3L LUC7L IFT140 TSR3 NARFL DDX11L10 ABCA3 PDPK1 RPS2 HBQ1 RGS11 C16orf59 NUBP2 NTN3 LOC652276 SYNGR3 LINC00235 TELO2 SPSB3 WASIR2 MCRIP2 TMEM8A MPG FLJ42627 FAM234A LOC101929280 LOC105371045 MIR6768 TBL3 NTHL1 MAPK8IP3 LOC100287175 FAHD1 GNG13 STUB1 HBA1 RNF151 LOC107987233 MIR3180-5 RAB26 LOC105371046 SSTR5 RAB11FIP3 PRSS29P RHBDL1 HBZ HAGH LOC105371184 E4F1 MIR3677 IGFALS SNHG19 LOC729652 METTL26 NOXO1 MEIOB NHLRC4 MSLN TPSG1 MIR6859-4
nsv571172 Chr.16:1764390 - 1817039 on Build GRCh38 Loss NUBP2 HAGH EME2 MRPS34 SPSB3 IGFALS NME3 MAPK8IP3
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion NUBP2 EME2 MRPS34 SPSB3 IGFALS MIR3177 NME3 MAPK8IP3
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss NUBP2 EME2 MRPS34 SPSB3 IGFALS NME3 MAPK8IP3
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss HAGH HN1L IGFALS CRAMP1 NME3 MAPK8IP3 NUBP2 LOC105371046 EME2 MRPS34 SPSB3 MIR3177 IFT140
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss NUBP2 EME2 MRPS34 SPSB3 IGFALS NME3 MAPK8IP3
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss HAGH HN1L IGFALS CRAMP1 NME3 MAPK8IP3 FAHD1 LOC105371047 NUBP2 LOC105371046 EME2 MRPS34 MEIOB TELO2 SPSB3 MIR3177 TMEM204 IFT140
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain NUBP2 EME2 MRPS34 SPSB3 IGFALS NME3 MAPK8IP3
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss EME2 MRPS34 SPSB3 NME3 MAPK8IP3
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss HAGH HN1L IGFALS CRAMP1 NME3 MAPK8IP3 FAHD1 NUBP2 EME2 MRPS34 MEIOB SPSB3 MIR3177
nsv457336 Chr.16:1752231 - 1791032 on Build GRCh38 Loss NUBP2 EME2 MRPS34 SPSB3 IGFALS NME3 MAPK8IP3
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion FAHD1 NUBP2 HAGH EME2 MRPS34 SPSB3 IGFALS MIR3177 NME3 MAPK8IP3

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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