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See other EME2 CNV Assays ›
Gene Symbol
EME2
Assay Reference Genome
Location

Chr.16:1775044 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01025647_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 197342

Gene Name:

 essential meiotic structure-specific endonuclease subunit 2

Gene Aliases:

 SLX2B, gs125

Location:

 Chr.16:1773222-1776714 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 4
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
EME2 NM_001257370.1 NP_001244299.1
XM_017023025.1 XP_016878514.1
XM_017023026.1 XP_016878515.1
AK074080.2 BAB84906.2
EF452422.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv457335 Chr.16:1729694 - 1789022 on Build GRCh38 Loss NME3 EME2 NUBP2 MIR3177 MAPK8IP3 MRPS34 SPSB3
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication ECI1 RNPS1 FAHD1 DNASE1L2 TPSAB1 FBXL16 LOC105371038 LINC00254 MPG MIR4516 PIGQ AMDHD2 MAPK8IP3 RAB40C BRICD5 MLST8 MSRB1 LMF1-AS1 SYNGR3 MIR5587 LOC100287175 ZNF598 NHLRC4 SNORA10 SSTR5-AS1 C1QTNF8 NME4 METRN FAM234A LOC100134368 STUB1 TSR3 TELO2 NTHL1 MIR6768 MSLN NPW PGP LOC105371047 WDR90 RPUSD1 LOC105371046 ATP6V0C SLC9A3R2 LOC105371049 HBQ1 SNORA64 PRSS27 HAGHL RNF151 NUBP2 MIR3178 PDIA2 TRAF7 IGFALS TSC2 MIR3677 GNPTG CASKIN1 HS3ST6 AXIN1 MRPL28 SOX8 MIR3180-5 CAPN15 RHBDL1 MRPS34 NTN3 MEIOB MIR662 CHTF18 LOC107984876 WFIKKN1 HAGH TPSD1 MIR6859-4 RAB11FIP3 TPSG1 DECR2 SNHG9 MCRIP2 FLJ42627 METTL26 CRAMP1 TPSB2 RHBDF1 CCDC154 IFT140 SPSB3 ARHGDIG MIR3177 LINC00235 LUC7L PTX4 SNRNP25 WDR24 LOC101929280 SNHG19 C16orf91 MIR940 GNG13 MIR6767 HBA2 RPS2 NOXO1 TBC1D24 FAM173A UBE2I E4F1 PDPK1 CEMP1 LOC106660606 CCNF LOC105371045 LOC729652 DDX11L10 HN1L LOC105371184 SNORD60 ABCA17P LOC652276 C16orf59 MIR6511B1 MIR1225 ABCA3 SNORA78 WASIR2 HBZ PRSS29P ERVK13-1 RPL23AP5 LMF1 NARFL PRR35 RPL3L RGS11 LOC107987233 SSTR5 JMJD8 CLCN7 NDUFB10 PRR25 UNKL NME3 EME2 RHOT2 NPRL3 GFER MIR3176 POLR3K BAIAP3 MIR4717 RAB26 CACNA1H TMEM204 PKD1 TBL3 CCDC78 HBA1 HBM TMEM8A KCTD5
esv3892756 Chr.16:1764390 - 1780436 on Build GRCh38 Loss NME3 EME2 MAPK8IP3 MRPS34 SPSB3
nsv1160328 Chr.16:1704619 - 1797867 on Build GRCh38 Deletion NME3 EME2 NUBP2 MIR3177 IGFALS MAPK8IP3 MRPS34 SPSB3
nsv571171 Chr.16:1757779 - 1804539 on Build GRCh38 Gain+Loss NME3 EME2 NUBP2 IGFALS MAPK8IP3 MRPS34 SPSB3
dgv4856n54 Chr.16:1600945 - 1813519 on Build GRCh38 Loss NME3 EME2 CRAMP1 LOC105371046 MAPK8IP3 MRPS34 IFT140 SPSB3 NUBP2 HAGH MIR3177 IGFALS HN1L
nsv471069 Chr.16:1754356 - 1791032 on Build GRCh38 Loss NME3 EME2 NUBP2 IGFALS MAPK8IP3 MRPS34 SPSB3
nsv1051692 Chr.16:1505070 - 1866102 on Build GRCh38 Loss NME3 EME2 CRAMP1 FAHD1 LOC105371047 LOC105371046 MAPK8IP3 MRPS34 IFT140 MEIOB SPSB3 NUBP2 TMEM204 HAGH MIR3177 IGFALS TELO2 HN1L
nsv827500 Chr.16:1761258 - 1795126 on Build GRCh38 Gain NME3 EME2 NUBP2 IGFALS MAPK8IP3 MRPS34 SPSB3
nsv518641 Chr.16:1645775 - 1835631 on Build GRCh38 Loss NME3 EME2 CRAMP1 FAHD1 MAPK8IP3 MRPS34 MEIOB SPSB3 NUBP2 HAGH MIR3177 IGFALS HN1L
nsv571173 Chr.16:1767596 - 1780436 on Build GRCh38 Loss NME3 EME2 MAPK8IP3 MRPS34 SPSB3
nsv952900 Chr.16:1724500 - 1827999 on Build GRCh38 Deletion NME3 EME2 NUBP2 FAHD1 HAGH MIR3177 IGFALS MAPK8IP3 MRPS34 SPSB3
nsv571170 Chr.16:1752231 - 1791032 on Build GRCh38 Loss NME3 EME2 NUBP2 IGFALS MAPK8IP3 MRPS34 SPSB3

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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