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See other CBFA2T3 CNV Assays ›
Gene Symbol
CBFA2T3
Assay Reference Genome
Location

Chr.16:88876027 on build GRCh38
Cytoband
16q24.3
Assay ID Hs01027805_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 863

Gene Name:

 CBFA2/RUNX1 translocation partner 3

Gene Aliases:

 ETO2, MTG16, MTGR2, RUNX1T3, ZMYND4

Location:

 Chr.16:88874855-88977198 on Build GRCh38

Assay Gene Location:

 Within Exon 15
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CBFA2T3 NM_005187.5 12 3200 NP_005178.4
NM_175931.2 11 2866 NP_787127.1
XM_005256323.4 11 3178 XP_005256380.1
AB010419.1 12 3069 BAA29061.1
AB010420.1 11 2866 BAA29062.1
AK090985.1 3 1878

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv37n68 Chr.16:88767460 - 88944903 on Build GRCh38 Loss GALNS LOC101927793 LOC107987238 TRAPPC2L LOC100129697 APRT PABPN1L CBFA2T3 PIEZO1 CDT1 LOC105371409
nsv1063024 Chr.16:88707330 - 89238482 on Build GRCh38 Gain LOC101927793 LINC00304 LOC107987238 SLC22A31 LOC100129697 PABPN1L CDH15 LOC400558 GALNS ZNF778 LOC339059 ACSF3 LOC100289580 TRAPPC2L MIR4722 APRT CBFA2T3 PIEZO1 CDT1 CTU2 LOC105371409
nsv1928 Chr.16:88865211 - 88897277 on Build GRCh38 Insertion LOC101927793 PABPN1L CBFA2T3
nsv471115 Chr.16:88801844 - 89197442 on Build GRCh38 Loss LOC101927793 LINC00304 LOC107987238 SLC22A31 LOC100129697 PABPN1L CDH15 LOC400558 GALNS ACSF3 TRAPPC2L APRT CBFA2T3 CDT1 LOC105371409
dgv507n67 Chr.16:88874423 - 88876971 on Build GRCh38 Gain CBFA2T3
nsv573674 Chr.16:88738775 - 89325907 on Build GRCh38 Gain LOC105371414 LOC101927793 LINC00304 LOC107987238 SLC22A31 LOC100129697 PABPN1L CDH15 LOC400558 GALNS ZNF778 LOC339059 ACSF3 LOC100289580 TRAPPC2L APRT LOC100287036 CBFA2T3 PIEZO1 CDT1 ANKRD11 LOC105371409
esv3639555 Chr.16:88745961 - 88899576 on Build GRCh38 Gain GALNS LOC101927793 LOC107987238 TRAPPC2L APRT PABPN1L CBFA2T3 PIEZO1 CDT1
nsv952071 Chr.16:88790893 - 89019992 on Build GRCh38 Deletion GALNS LOC101927793 LOC107987238 TRAPPC2L LOC100129697 APRT PABPN1L CBFA2T3 CDT1 LOC105371409
nsv521217 Chr.16:88805821 - 89174375 on Build GRCh38 Loss LOC101927793 LINC00304 LOC107987238 LOC100129697 PABPN1L CDH15 LOC400558 GALNS ACSF3 TRAPPC2L APRT CBFA2T3 CDT1 LOC105371409
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss LOC105371414 MC1R VPS9D1 FANCA SPATA2L CDH15 SPG7 CDK10 LOC339059 DBNDD1 MIR4722 APRT LOC100287036 TUBB8P7 LOC105371409 CPNE7 LOC107984817 LOC101927793 LOC107987238 PRDM7 SNAI3 SNORD68 TUBB3 PABPN1L GAS8-AS1 DEF8 LOC400558 ZNF276 MVD LOC100289580 URAHP VPS9D1-AS1 PIEZO1 CDT1 CTU2 ANKRD11 LOC105371419 SPIRE2 LOC101927817 SNAI3-AS1 CYBA RNF166 ZNF778 AFG3L1P DPEP1 SPATA33 LINC00304 CENPBD1 SLC22A31 LOC100129697 TCF25 GALNS CHMP1A IL17C RPL13 GAS8 ACSF3 TRAPPC2L FAM157C CBFA2T3
esv3639561 Chr.16:88837996 - 88882065 on Build GRCh38 Gain GALNS TRAPPC2L PABPN1L CBFA2T3
nsv1061256 Chr.16:88711587 - 89013365 on Build GRCh38 Gain LOC101927793 LOC107987238 LOC100129697 PABPN1L GALNS LOC339059 LOC100289580 TRAPPC2L MIR4722 APRT CBFA2T3 PIEZO1 CDT1 CTU2 LOC105371409

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