Genomic Map
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Target Gene Details
Entrez Gene ID: | 284415 |
Gene Name: | V-set and transmembrane domain containing 1 |
Gene Aliases: |
SIRL-1, SIRL1, UNQ3033 |
Location: |
Chr.19:54040825-54063966 on Build GRCh38 |
Assay Gene Location: | Overlaps Intron 5 - Intron 6 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| VSTM1 | NM_001288791.1 | NP_001275720.1 | ||
| NM_001288792.1 | NP_001275721.1 | |||
| NM_001288793.1 | NP_001275722.1 | |||
| NM_198481.3 | NP_940883.2 | |||
| NR_110142.1 | ||||
| XM_011526845.1 | XP_011525147.1 | |||
| XM_011526846.1 | XP_011525148.1 | |||
| XM_011526847.1 | XP_011525149.1 | |||
| XM_011526848.1 | XP_011525150.1 | |||
| XM_011526849.1 | XP_011525151.1 | |||
| XM_017026666.1 | XP_016882155.1 | |||
| AY358542.1 | AAQ88906.1 | |||
| BC100943.2 | AAI00944.1 | |||
| BQ446114.1 | ||||
| DQ479397.1 | ||||
| FJ584316.1 | ||||
| FJ584317.1 | ||||
| FJ584318.1 | ||||
| FJ584319.1 | ||||
| FJ584320.1 | ||||
| FJ882051.1 | ||||
| FN398145.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv458782 | Chr.19:53961144 - 54093354 on Build GRCh38 | Gain |
 VSTM1
CACNG8
CACNG6
TARM1
MIR935
|
| nsv510773 | Chr.19:54017180 - 54132236 on Build GRCh38 | Deletion |
VSTM1
OSCAR
PRPF31
NDUFA3
TFPT
TARM1
|
| nsv182 | Chr.19:54050737 - 54097924 on Build GRCh38 | Deletion |
VSTM1
OSCAR
TARM1
|
| nsv435707 | Chr.19:54050726 - 54058212 on Build GRCh38 | Deletion |
VSTM1
|
| nsv1071550 | Chr.19:54050645 - 54057446 on Build GRCh38 | Deletion |
VSTM1
|
| nsv1063127 | Chr.19:53926876 - 54068977 on Build GRCh38 | Gain |
VSTM1
CACNG8
CACNG7
CACNG6
MIR935
|
| nsv9750 | Chr.19:54049927 - 54058628 on Build GRCh38 | Gain |
VSTM1
|
| esv2718812 | Chr.19:53184636 - 54322450 on Build GRCh38 | Deletion |
MIR518D
MIR371A
DPRX
LILRA6
MIR371B
CACNG6
BIRC8
MIR1323
MIR1283-2
MIR373
MIR517A
MIR520G
ZNF331
LOC284379
VSTM1
LENG1
MIR512-1
MIR518F
MIR521-1
PRKCG
NDUFA3
MIR526A2
LILRB3
MIR517B
MIR525
MIR519A2
TARM1
TSEN34
MIR520C
MYADM
LILRB2
ZNF818P
CNOT3
MIR527
MIR520F
MIR526A1
ZNF813
MIR524
MIR372
MIR516A2
PRPF31
MIR519D
TFPT
MIR520A
VN1R4
MIR521-2
TMC4
NLRP12
OSCAR
MIR1283-1
MIR512-2
MIR523
ZNF665
ZNF761
MIR516B2
RPS9
MIR515-1
MIR515-2
MBOAT7
MIR520H
ZNF845
CACNG8
MIR4752
LILRA5
MIR518A1
MIR498
LILRB5
MIR518E
MIR519B
MIR520E
MIR518C
FAM90A27P
MIR522
ZNF525
ZNF677
MIR516B1
MIR517C
ZNF765
VN1R2
CACNG7
MIR519C
MIR518B
TPM3P9
LOC105372457
MIR519E
MIR520D
MIR516A1
MIR520B
MIR526B
MIR518A2
MIR519A1
MIR935
|
| dgv6541n54 | Chr.19:54049610 - 54057172 on Build GRCh38 | Loss |
VSTM1
|
| esv2552009 | Chr.19:54051426 - 54057890 on Build GRCh38 | Deletion |
VSTM1
|
| nsv833877 | Chr.19:53951529 - 54117323 on Build GRCh38 | Loss |
VSTM1
OSCAR
CACNG8
PRPF31
NDUFA3
TFPT
CACNG6
TARM1
MIR935
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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