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See other SAPCD2 CNV Assays ›
Gene Symbol
SAPCD2
Assay Reference Genome
Location

Chr.9:137064776 on build GRCh38
Cytoband
9q34.3
Assay ID Hs01053989_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 89958

Gene Name:

 suppressor APC domain containing 2

Gene Aliases:

 C9orf140, p42.3

Location:

 Chr.9:137062127-137070576 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SAPCD2 NM_178448.3 NP_848543.2
XM_011519180.2 XP_011517482.1
BC009435.1 1 44 AAH09435.1
BC048267.1 AAH48267.1
DQ150361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss DPP7 C9orf139 ENTPD2 PRR31 LRRC26 MAN1B1 TMEM210 SAPCD2 FUT7 NPDC1 CLIC3 MAN1B1-AS1 C9orf142 GRIN1 LOC101930307 ABCA2 UAP1L1 PTGDS LCNL1 MIR3621
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss DPP7 MAN1B1-AS1 ENTPD2 GRIN1 LOC101930307 UAP1L1 MAN1B1 SAPCD2
nsv616006 Chr.9:137057859 - 137083633 on Build GRCh38 Loss UAP1L1 SAPCD2
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss PHPT1 MAMDC4 TUBB4B EDF1 FBXW5 NPDC1 NSMF C8G GRIN1 LOC101930307 ABCA2 EXD3 DPP7 ENTPD8 LCN12 FAM166A C9orf172 NOXA1 MAN1B1-AS1 MIR4479 NELFB CYSRT1 PTGDS LCNL1 CCDC183 ENTPD2 MAN1B1 TMEM210 TOR4A CLIC3 SLC34A3 C9orf173-AS1 NDOR1 PNPLA7 SSNA1 UAP1L1 TMEM203 MIR3621 NRARP RABL6 C9orf139 CCDC183-AS1 TPRN PRR31 LRRC26 ANAPC2 STPG3 SAPCD2 FUT7 C9orf142 RNF224 MIR7114 MIR4292 RNF208 TRAF2
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion DPP7 C9orf139 ENTPD2 LCN12 PRR31 MAN1B1 SAPCD2 FUT7 NPDC1 CLIC3 MAN1B1-AS1 C8G C9orf142 LOC101930307 ABCA2 UAP1L1 PTGDS LCNL1
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss MIR4674 PHPT1 EGFL7 LOC100128593 SNHG7 MAMDC4 EDF1 FBXW5 NPDC1 C8G GRIN1 LOC101930307 ABCA2 INPP5E HSPC324 DPP7 CARD9 AGPAT2 MIR6722 TMEM141 LCN12 C9orf172 MIR4673 SEC16A SNAPC4 LCN6 SNORA17A NALT1 SDCCAG3 MAN1B1-AS1 MIR4479 PTGDS LCN8 LCNL1 MIR126 CCDC183 FAM69B ENTPD2 MAN1B1 TMEM210 LCN10 LCN15 CLIC3 UAP1L1 MIR3621 RABL6 LINC01451 C9orf139 CCDC183-AS1 PRR31 SNORA17B LRRC26 SAPCD2 NOTCH1 FUT7 C9orf163 C9orf142 DNLZ MIR4292 PMPCA TRAF2
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain DPP7 C9orf139 ENTPD2 LRRC26 MAN1B1 ANAPC2 TMEM210 SAPCD2 FUT7 NPDC1 MAN1B1-AS1 GRIN1 SSNA1 LOC101930307 UAP1L1 MIR3621
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss DPP7 C9orf139 ENTPD2 LRRC26 MAN1B1 TMEM210 SAPCD2 NPDC1 MAN1B1-AS1 GRIN1 LOC101930307 UAP1L1 MIR3621
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion PHPT1 EGFL7 LOC100128593 SNHG7 MAMDC4 TUBB4B EDF1 FBXW5 NPDC1 C8G GRIN1 LOC101930307 ABCA2 HSPC324 EXD3 DPP7 AGPAT2 MIR6722 TMEM141 LCN12 FAM166A C9orf172 LCN6 SNORA17A MAN1B1-AS1 MIR4479 NELFB CYSRT1 PTGDS LCN8 LCNL1 MIR126 CCDC183 FAM69B ENTPD2 MAN1B1 TMEM210 TOR4A LCN10 LCN15 CLIC3 SLC34A3 C9orf173-AS1 NDOR1 SSNA1 UAP1L1 TMEM203 MIR3621 NRARP RABL6 LINC01451 C9orf139 CCDC183-AS1 TPRN PRR31 SNORA17B LRRC26 ANAPC2 STPG3 SAPCD2 FUT7 C9orf142 RNF224 MIR4292 RNF208 TRAF2
nsv982354 Chr.9:137057355 - 137073859 on Build GRCh38 Duplication SAPCD2

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

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