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See other ATP2A1 CNV Assays ›
Gene Symbol
ATP2A1
Assay Reference Genome
Location

Chr.16:28878576 on build GRCh38
Cytoband
16p11.2
Assay ID Hs01062611_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 487

Gene Name:

 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1

Gene Aliases:

 ATP2A, SERCA1

Location:

 Chr.16:28878488-28904509 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP2A1 NM_004320.4 1 89 NP_004311.1
NM_173201.3 1 89 NP_775293.1
AK291314.1
BC037354.1 AAH37354.1
BX537389.1 1 85 CAD97631.1
BX537784.1 1 87 CAD97841.1
BX647365.1 1 85
BX647366.1 1 81
BX647367.1 1 89
BX648544.1 1 86
BX649072.1 1 78

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4987n54 Chr.16:28824884 - 29032129 on Build GRCh38 Gain LAT NFATC2IP CD19 ATP2A1 RABEP2 ATP2A1-AS1 MIR4517 TUFM ATXN2L SPNS1 SH2B1 MIR4721
esv3892826 Chr.16:28814728 - 29032129 on Build GRCh38 Gain+Loss LAT NFATC2IP CD19 ATP2A1 RABEP2 ATP2A1-AS1 MIR4517 TUFM ATXN2L SPNS1 SH2B1 MIR4721
esv3638349 Chr.16:28860611 - 28907894 on Build GRCh38 Gain ATP2A1 RABEP2 ATP2A1-AS1 SH2B1
esv2758640 Chr.16:28163817 - 29139232 on Build GRCh38 Gain+Loss MIR6862-1 EIF3C NPIPB9 LAT IL27 RABEP2 RRN3P2 MIR6862-2 SH2B1 MIR4721 XPO6 CLN3 APOBR ATXN2L SPNS1 NPIPB6 SGF29 CD19 SULT1A1 NPIP NPIPB8 SULT1A2 NFATC2IP SBK1 ATP2A1 ATP2A1-AS1 MIR4517 TUFM NUPR1 EIF3CL LOC101928215
nsv519100 Chr.16:28826194 - 29032129 on Build GRCh38 Gain LAT NFATC2IP CD19 ATP2A1 RABEP2 ATP2A1-AS1 MIR4517 TUFM ATXN2L SPNS1 SH2B1 MIR4721
nsv1059555 Chr.16:28373144 - 29195838 on Build GRCh38 Gain MIR6862-1 EIF3C NPIPB9 LOC107984832 LAT IL27 RABEP2 RRN3P2 MIR6862-2 SH2B1 MIR4721 CLN3 APOBR ATXN2L SPNS1 SGF29 CD19 SULT1A1 NPIP NPIPB8 SULT1A2 NFATC2IP ATP2A1 ATP2A1-AS1 MIR4517 TUFM NUPR1 EIF3CL LOC101928215
dgv2831n100 Chr.16:28812594 - 29032542 on Build GRCh38 Gain LAT NFATC2IP CD19 ATP2A1 RABEP2 ATP2A1-AS1 MIR4517 TUFM ATXN2L SPNS1 SH2B1 MIR4721
esv3570454 Chr.16:28799004 - 29032129 on Build GRCh38 Gain LAT NFATC2IP CD19 ATP2A1 RABEP2 ATP2A1-AS1 MIR4517 TUFM ATXN2L SPNS1 SH2B1 MIR4721
nsv571805 Chr.16:28824174 - 29032129 on Build GRCh38 Loss LAT NFATC2IP CD19 ATP2A1 RABEP2 ATP2A1-AS1 MIR4517 TUFM ATXN2L SPNS1 SH2B1 MIR4721
dgv2830n100 Chr.16:28620264 - 29032542 on Build GRCh38 Gain EIF3C NPIPB9 LAT CD19 SULT1A1 RABEP2 MIR6862-2 SH2B1 NPIPB8 MIR4721 NFATC2IP ATP2A1 ATP2A1-AS1 MIR4517 TUFM ATXN2L SPNS1

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