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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:868831 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01072986_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Exon 19
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 14 2456 NP_001136146.1
NM_001142675.1 13 2566 NP_001136147.1
NM_001142676.1 14 2427 NP_001136148.1
NM_001142677.1 12 2259 NP_001136149.1
NM_023947.3 13 2352 NP_076436.3
AK027711.1 13 2301 BAB55316.1
AK124697.1 13 2928
AK301245.1
BC095409.1 13 2288 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625087 Chr.11:860117 - 882352 on Build GRCh38 Gain TSPAN4 CHID1
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain LOC171391 CEND1 TSPAN4 AP2A2 CRACR2B SNORA52 RPLP2 CD151 PNPLA2 SLC25A22 PANO1 PIDD1 POLR2L CHID1 PDDC1
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss SCT CDHR5 AP2A2 CRACR2B RPLP2 TOLLIP-AS1 PNPLA2 DRD4 SLC25A22 LOC101059906 PHRF1 MUC6 RASSF7 RNH1 LRRC56 MUC5B LOC101927503 HRAS PTDSS2 POLR2L SIGIRR IRF7 DEAF1 LOC171391 CEND1 TSPAN4 TOLLIP TMEM80 MIR210HG MIR6744 SNORA52 CD151 MUC5AC TALDO1 PANO1 PIDD1 MIR210 ANO9 CHID1 MUC2 EPS8L2 PDDC1 LOC143666 LMNTD2
nsv552887 Chr.11:841284 - 876755 on Build GRCh38 Loss TSPAN4 POLR2L CHID1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion SCT CDHR5 AP2A2 CRACR2B RPLP2 PKP3 PNPLA2 DRD4 SLC25A22 LOC101059906 PHRF1 RASSF7 RNH1 LRRC56 HRAS PTDSS2 POLR2L SIGIRR IRF7 DEAF1 LOC171391 CEND1 TSPAN4 TMEM80 MIR210HG SNORA52 CD151 TALDO1 PANO1 PIDD1 MIR210 ANO9 B4GALNT4 CHID1 EPS8L2 PDDC1 LOC143666 LMNTD2
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion BRSK2 TSPAN4 TOLLIP MIR6744 AP2A2 TOLLIP-AS1 MUC5AC MUC6 MUC5B LOC101927503 CHID1 MUC2 MOB2
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion SCT CDHR5 CRACR2B RPLP2 PNPLA2 DRD4 SLC25A22 LOC101059906 PHRF1 RASSF7 RNH1 LRRC56 HRAS PTDSS2 POLR2L IRF7 DEAF1 LOC171391 CEND1 TSPAN4 TMEM80 MIR210HG SNORA52 CD151 TALDO1 PANO1 PIDD1 MIR210 CHID1 EPS8L2 PDDC1 LOC143666 LMNTD2
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss LOC171391 CEND1 TSPAN4 CRACR2B SNORA52 RPLP2 CD151 PNPLA2 SLC25A22 PANO1 PIDD1 POLR2L CHID1 PDDC1
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss SCT CDHR5 AP2A2 CRACR2B RPLP2 PKP3 PNPLA2 DRD4 SLC25A22 LOC101059906 PHRF1 MUC6 RASSF7 RNH1 LRRC56 MUC5B LOC101927503 HRAS PTDSS2 POLR2L SIGIRR IRF7 DEAF1 LOC171391 CEND1 TSPAN4 TOLLIP TMEM80 MIR210HG MIR6744 SNORA52 CD151 MUC5AC TALDO1 PANO1 PIDD1 MIR210 ANO9 B4GALNT4 CHID1 MUC2 EPS8L2 PDDC1 LOC143666 LMNTD2
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain MUC6 TSPAN4 AP2A2 CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion BRSK2 TSPAN4 TOLLIP MIR6744 AP2A2 TOLLIP-AS1 MUC5AC MUC6 MUC5B LOC101927503 CHID1 MUC2 MOB2
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss TSPAN4 PIDD1 AP2A2 POLR2L CHID1 CRACR2B SNORA52 RPLP2 CD151 PNPLA2
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss LOC171391 CEND1 TSPAN4 CRACR2B SNORA52 RPLP2 CD151 PNPLA2 SLC25A22 PANO1 PIDD1 POLR2L CHID1 PDDC1
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain TSPAN4 POLR2L CHID1 CRACR2B CD151 PNPLA2
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion LOC171391 CEND1 TSPAN4 CRACR2B SNORA52 RPLP2 CD151 TALDO1 PNPLA2 SLC25A22 PANO1 PIDD1 POLR2L CHID1 PDDC1

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