Hs01075382_cn

• Gene Symbol: KDM5D
• Assay Reference Genome Location: Chr.Y:19706629 on build GRCh38
• Cytoband: Yq11.223

Target Gene Details

• Entrez Gene ID: 8284
• Gene Name: lysine demethylase 5D
• Gene Aliases: HY, HYA, JARID1D, SMCY
• Location: Chr.Y:19692495-19745347 on Build GRCh38
• Assay Gene Location: Overlaps Intron 26 - Exon 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
KDM5D	NM_001146705.1			NP_001140177.1
	NM_001146706.1			NP_001140178.1
	NM_004653.4			NP_004644.2
	XM_005262560.2			XP_005262617.1
	XM_005262561.2			XP_005262618.1
	XM_011531468.2			XP_011529770.1
	AK095923.1
	AK127269.1	14	4286
	BC132721.1
	BC144102.1
	BC146767.1
	BX648643.1	11	2832
	D87072.1
	U52191.1			AAC50806.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv10025	Chr.Y:18865177 - 20859250 on Build GRCh38	Gain	TXLNGY TTTY10 KDM5D RPS4Y2 EIF1AY TTTY14 CD24P4 LOC107987336 BCORP1 LOC107987345

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

histone modifying enzyme

Gene Ontology Categories:

Process(es)

T cell antigen processing and presentation
histone H3-K4 demethylation
oxidation-reduction process

Function(s)

DNA binding
zinc ion binding
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
histone demethylase activity
histone demethylase activity (H3-K4 specific)