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See other CHID1 CNV Assays ›
Gene Symbol
CHID1
Assay Reference Genome
Location

Chr.11:869079 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01129177_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 66005

Gene Name:

 chitinase domain containing 1

Gene Aliases:

 GL008, SI-CLP, SICLP

Location:

 Chr.11:867859-915058 on Build GRCh38

Assay Gene Location:

 Within Exon 19
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHID1 NM_001142674.1 14 2208 NP_001136146.1
NM_001142675.1 13 2318 NP_001136147.1
NM_001142676.1 14 2179 NP_001136148.1
NM_001142677.1 12 2011 NP_001136149.1
NM_023947.3 13 2104 NP_076436.3
AK027711.1 13 2053 BAB55316.1
AK124697.1 13 2680
AK301245.1
BC095409.1 13 2040 AAH95409.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv3625087 Chr.11:860117 - 882352 on Build GRCh38 Gain TSPAN4 CHID1
dgv1013n100 Chr.11:772982 - 933569 on Build GRCh38 Gain PIDD1 TSPAN4 AP2A2 SLC25A22 LOC171391 CD151 CHID1 CRACR2B RPLP2 PDDC1 PANO1 SNORA52 CEND1 PNPLA2 POLR2L
esv2759794 Chr.11:409846 - 1336162 on Build GRCh38 Loss MUC5AC PIDD1 SLC25A22 LOC171391 CD151 DRD4 IRF7 HRAS CHID1 PTDSS2 LOC143666 TALDO1 MIR210 LOC101059906 RASSF7 PDDC1 PANO1 TOLLIP-AS1 PHRF1 POLR2L ANO9 MIR210HG DEAF1 TSPAN4 MIR6744 AP2A2 LMNTD2 MUC2 SCT MUC5B TMEM80 CRACR2B RPLP2 EPS8L2 MUC6 LRRC56 SNORA52 RNH1 CEND1 CDHR5 PNPLA2 SIGIRR TOLLIP LOC101927503
nsv552887 Chr.11:841284 - 876755 on Build GRCh38 Loss TSPAN4 POLR2L CHID1
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PIDD1 SLC25A22 LOC171391 CD151 DRD4 IRF7 HRAS CHID1 PTDSS2 LOC143666 TALDO1 MIR210 B4GALNT4 LOC101059906 RASSF7 PDDC1 PANO1 PHRF1 POLR2L ANO9 PKP3 MIR210HG DEAF1 TSPAN4 AP2A2 LMNTD2 SCT TMEM80 CRACR2B RPLP2 EPS8L2 LRRC56 SNORA52 RNH1 CEND1 CDHR5 PNPLA2 SIGIRR
esv2743878 Chr.11:864732 - 1489652 on Build GRCh38 Deletion MUC5AC TSPAN4 BRSK2 MIR6744 AP2A2 MOB2 MUC2 CHID1 MUC5B MUC6 TOLLIP-AS1 TOLLIP LOC101927503
nsv1159791 Chr.11:461793 - 909492 on Build GRCh38 Deletion PIDD1 SLC25A22 LOC171391 CD151 DRD4 IRF7 HRAS CHID1 PTDSS2 LOC143666 TALDO1 MIR210 LOC101059906 RASSF7 PDDC1 PANO1 PHRF1 POLR2L MIR210HG DEAF1 TSPAN4 LMNTD2 SCT TMEM80 CRACR2B RPLP2 EPS8L2 LRRC56 SNORA52 RNH1 CEND1 CDHR5 PNPLA2
nsv552871 Chr.11:766479 - 870446 on Build GRCh38 Loss PIDD1 TSPAN4 SLC25A22 LOC171391 CD151 CHID1 CRACR2B RPLP2 PDDC1 PANO1 SNORA52 CEND1 PNPLA2 POLR2L
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss MUC5AC PIDD1 SLC25A22 LOC171391 CD151 DRD4 IRF7 HRAS CHID1 PTDSS2 LOC143666 TALDO1 MIR210 B4GALNT4 LOC101059906 RASSF7 PDDC1 PANO1 PHRF1 POLR2L ANO9 PKP3 MIR210HG DEAF1 TSPAN4 MIR6744 AP2A2 LMNTD2 MUC2 SCT MUC5B TMEM80 CRACR2B RPLP2 EPS8L2 MUC6 LRRC56 SNORA52 RNH1 CEND1 CDHR5 PNPLA2 SIGIRR TOLLIP LOC101927503
dgv175e214 Chr.11:851409 - 1043855 on Build GRCh38 Gain TSPAN4 AP2A2 MUC6 CHID1
esv2669189 Chr.11:864834 - 1489637 on Build GRCh38 Deletion MUC5AC TSPAN4 BRSK2 MIR6744 AP2A2 MOB2 MUC2 CHID1 MUC5B MUC6 TOLLIP-AS1 TOLLIP LOC101927503
nsv832044 Chr.11:809019 - 938308 on Build GRCh38 Loss PIDD1 TSPAN4 AP2A2 CRACR2B RPLP2 CD151 SNORA52 PNPLA2 POLR2L CHID1
nsv1040044 Chr.11:776335 - 900929 on Build GRCh38 Gain+Loss PIDD1 TSPAN4 SLC25A22 LOC171391 CD151 CHID1 CRACR2B RPLP2 PDDC1 PANO1 SNORA52 CEND1 PNPLA2 POLR2L
nsv1048774 Chr.11:816471 - 900929 on Build GRCh38 Gain TSPAN4 CRACR2B CD151 PNPLA2 POLR2L CHID1
nsv951272 Chr.11:751201 - 911500 on Build GRCh38 Deletion PIDD1 TSPAN4 SLC25A22 LOC171391 CD151 CHID1 TALDO1 CRACR2B RPLP2 PDDC1 PANO1 SNORA52 CEND1 PNPLA2 POLR2L

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