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See other CHTF18 CNV Assays ›
Gene Symbol
CHTF18
Assay Reference Genome
Location

Chr.16:796003 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01159688_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 63922

Gene Name:

 chromosome transmission fidelity factor 18

Gene Aliases:

 C16orf41, C321D2.2, C321D2.3, C321D2.4, CHL12, Ctf18, RUVBL

Location:

 Chr.16:788622-798074 on Build GRCh38

Assay Gene Location:

 Within Exon 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CHTF18 NM_022092.2 18 2445 NP_071375.1
XM_005255470.1 18 2424 XP_005255527.1
XM_005255471.3 17 2527 XP_005255528.1
XM_011522572.1 18 2444 XP_011520874.1
XM_011522573.1 10 1404 XP_011520875.1
XM_017023532.1 18 2408 XP_016879021.1
XM_017023533.1 17 2219 XP_016879022.1
XM_017023534.1 18 2436 XP_016879023.1
AK024476.1 15 3851 BAB15766.1
AK128869.1 14 3454
BC006278.2 18 2412 AAH06278.2
BC006437.1 17 2505 AAH06437.1
BC018184.1 18 2420 AAH18184.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv4828n54 Chr.16:760143 - 828324 on Build GRCh38 Gain PRR25 CHTF18 RPUSD1 GNG13 MSLN MIR662
esv3637582 Chr.16:751057 - 851536 on Build GRCh38 Gain PRR25 CHTF18 RPUSD1 GNG13 MSLN MIR662
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication E4F1 NME3 EME2 ABCA17P ABCA3 NTN3 TELO2 SYNGR3 MIR1225 SSTR5-AS1 RHBDF1 ARHGDIG PDIA2 SPSB3 PRSS29P NARFL SNHG19 RAB26 LOC107987233 RNPS1 LMF1-AS1 TMEM8A RNF151 LOC101929280 CASKIN1 RPL3L RPL23AP5 LOC105371038 ZNF598 MIR6767 SSTR5 PIGQ MEIOB LOC100134368 PRR35 LOC107984876 NME4 PRSS27 C16orf59 HN1L MIR4717 UBE2I MIR940 ECI1 TPSAB1 SLC9A3R2 RHBDL1 MIR3677 PRR25 MAPK8IP3 DNASE1L2 STUB1 CCNF UNKL ERVK13-1 NPRL3 HS3ST6 MIR3177 RAB11FIP3 NPW LOC105371045 RPUSD1 HAGHL MCRIP2 TPSG1 WFIKKN1 SNRNP25 POLR3K PGP C1QTNF8 PDPK1 LOC100287175 MIR6768 CHTF18 CACNA1H TSC2 RHOT2 DECR2 NDUFB10 CCDC78 FBXL16 PKD1 HBQ1 CEMP1 WASIR2 SNORA64 TBC1D24 SNORD60 RGS11 SNORA10 MPG BAIAP3 RAB40C TPSD1 SNORA78 TRAF7 MIR4516 NOXO1 HBA1 AMDHD2 LOC105371184 GNPTG MSRB1 NUBP2 WDR24 HAGH GFER MIR662 ATP6V0C MIR3180-5 LOC105371046 CAPN15 TBL3 LINC00235 CCDC154 LOC652276 BRICD5 LOC105371047 IGFALS MRPS34 MIR6859-4 SNHG9 MLST8 LOC105371049 HBA2 LINC00254 FLJ42627 WDR90 TSR3 LOC729652 NTHL1 IFT140 MSLN HBM LMF1 MRPL28 SOX8 CRAMP1 MIR3178 FAM173A AXIN1 NHLRC4 HBZ TMEM204 FAHD1 LOC106660606 LUC7L MIR5587 METRN TPSB2 MIR3176 GNG13 KCTD5 C16orf91 CLCN7 METTL26 RPS2 MIR6511B1 PTX4 FAM234A DDX11L10 JMJD8
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss RHBDL1 PRR25 RAB40C WDR90 STUB1 MSLN LOC105371184 NARFL RAB11FIP3 FAM173A LOC107987233 NHLRC4 WDR24 RPUSD1 HAGHL MCRIP2 MIR662 LOC101929280 WFIKKN1 MIR5587 CAPN15 METRN LOC100287175 LOC105371038 CHTF18 MIR3176 PIGQ LINC00235 GNG13 RHOT2 METTL26 CCDC78 PRR35 FBXL16 JMJD8
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss RHBDL1 PRR25 RAB40C WDR90 STUB1 MSLN LOC105371184 NARFL RAB11FIP3 FAM173A LOC107987233 NHLRC4 WDR24 RPUSD1 HAGHL MCRIP2 MIR662 LOC101929280 WFIKKN1 MIR5587 CAPN15 METRN LOC100287175 LOC105371038 CHTF18 MIR3176 PIGQ LINC00235 GNG13 RHOT2 METTL26 CCDC78 PRR35 FBXL16 JMJD8
esv3570042 Chr.16:793849 - 822928 on Build GRCh38 Gain PRR25 CHTF18 GNG13
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion RHBDL1 PRR25 RAB40C SSTR5-AS1 WDR90 STUB1 MSLN LOC105371184 NARFL LMF1 RAB11FIP3 SOX8 FAM173A LOC107987233 NHLRC4 WDR24 RPUSD1 LMF1-AS1 HAGHL MCRIP2 MIR662 LOC101929280 WFIKKN1 C1QTNF8 MIR5587 CAPN15 METRN LOC100287175 LOC105371038 CHTF18 MIR3176 SSTR5 PIGQ LINC00235 GNG13 RHOT2 METTL26 CCDC78 PRR35 LOC107984876 FBXL16 JMJD8
nsv571042 Chr.16:785298 - 847566 on Build GRCh38 Loss PRR25 CHTF18 RPUSD1 GNG13
nsv571044 Chr.16:790409 - 796798 on Build GRCh38 Loss CHTF18
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication RHBDL1 RAB40C WDR90 STUB1 MSLN LOC105371184 NARFL FAM173A WDR24 RPUSD1 HAGHL MCRIP2 MIR662 LOC101929280 WFIKKN1 METRN LOC100287175 LOC105371038 CHTF18 PIGQ GNG13 RHOT2 METTL26 CCDC78 FBXL16 JMJD8
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication RHBDL1 PRR25 RAB40C WDR90 STUB1 MSLN LOC105371184 NARFL RAB11FIP3 FAM173A LOC107987233 NHLRC4 WDR24 RPUSD1 HAGHL MCRIP2 MIR662 LOC101929280 WFIKKN1 MIR5587 CAPN15 METRN LOC100287175 LOC105371038 CHTF18 MIR3176 PIGQ LINC00235 GNG13 RHOT2 METTL26 CCDC78 PRR35 FBXL16 JMJD8
nsv571043 Chr.16:787857 - 798755 on Build GRCh38 Loss CHTF18 RPUSD1 GNG13
nsv817712 Chr.16:774098 - 810673 on Build GRCh38 Loss PRR25 CHTF18 RPUSD1 GNG13
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss RHBDL1 METRN WDR90 LOC100287175 LOC105371038 STUB1 CHTF18 GNG13 MSLN RHOT2 LOC105371184 CCDC78 NARFL FBXL16 FAM173A WDR24 RPUSD1 HAGHL MCRIP2 JMJD8 MIR662
nsv571045 Chr.16:790597 - 847566 on Build GRCh38 Gain PRR25 CHTF18 GNG13
nsv457312 Chr.16:760039 - 797743 on Build GRCh38 Loss CHTF18 RPUSD1 MSLN MIR662

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