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Gene Symbol
PAOX
Assay Reference Genome
Location

Chr.10:133388971 on build GRCh38
Cytoband
10q26.3
Assay ID Hs01161756_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 196743

Gene Name:

 polyamine oxidase (exo-N4-amino)

Gene Aliases:

 PAO

Location:

 Chr.10:133379237-133391696 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 5 - Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PAOX NM_152911.3 NP_690875.1
NM_207127.2 NP_997010.1
NM_207128.2 NP_997011.1
NR_109763.1
NR_109764.1
NR_109765.1
NR_109766.1
AF226657.1 AAN40706.1
AF312698.1 AAO63265.1
AK128001.1
AL834535.1 CAD39191.1
AY358418.1 AAQ88784.1
AY541513.1 AAS64373.1
AY541514.1 AAS64374.1
AY541515.1 AAS64375.1
AY541516.1 AAS64376.1
AY541517.1 AAS64377.1
AY541518.1 AAS64378.1
AY541519.1 AAS64379.1
AY541521.1 AAS64381.1
AY541522.1 AAS64382.1
AY541523.1 AAS64383.1
AY541524.1 AAS64384.1
BC032778.1 AAH32778.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759793 Chr.10:133030918 - 133619181 on Build GRCh38 Gain+Loss VENTX ECHS1 SPRN SCART1 ADAM8 KNDC1 SYCE1 MTG1 TUBGCP2 MIR202HG ADGRA1 SPRNP1 ZNF511 ADGRA1-AS1 FUOM CALY CYP2E1 MIR3944 PRAP1 UTF1 PAOX MIR202
nsv470980 Chr.10:133186655 - 133409514 on Build GRCh38 Loss VENTX ECHS1 ADAM8 KNDC1 MTG1 TUBGCP2 MIR202HG ZNF511 FUOM CALY MIR3944 PRAP1 UTF1 PAOX MIR202
nsv952707 Chr.10:133333097 - 133403896 on Build GRCh38 Deletion ECHS1 FUOM CALY MIR3944 MTG1 PRAP1 PAOX
nsv428243 Chr.10:133245214 - 133767422 on Build GRCh38 Gain ECHS1 SPRN SCART1 ADAM8 SYCE1 MTG1 TUBGCP2 MIR202HG SPRNP1 ZNF511 FUOM CALY CYP2E1 MIR3944 FRG2B PRAP1 PAOX MIR202
nsv552644 Chr.10:133328068 - 133402966 on Build GRCh38 Loss ECHS1 FUOM CALY MIR3944 MTG1 PRAP1 PAOX
nsv470981 Chr.10:133365107 - 133620799 on Build GRCh38 Gain ECHS1 SPRNP1 SPRN SCART1 SYCE1 CYP2E1 MIR3944 MTG1 PAOX
dgv2e196 Chr.10:133189913 - 133450541 on Build GRCh38 Duplication VENTX ECHS1 SPRN ADAM8 KNDC1 MTG1 TUBGCP2 MIR202HG ZNF511 FUOM CALY MIR3944 PRAP1 UTF1 PAOX MIR202
nsv7631 Chr.10:133388509 - 133573114 on Build GRCh38 Deletion SPRNP1 SPRN SCART1 SYCE1 CYP2E1 MTG1 PAOX
dgv35e55 Chr.10:133370615 - 133621047 on Build GRCh38 Gain ECHS1 SPRNP1 SPRN SCART1 SYCE1 CYP2E1 MIR3944 MTG1 PAOX
nsv1052904 Chr.10:133298340 - 133769367 on Build GRCh38 Gain ECHS1 SPRN SCART1 SYCE1 MTG1 TUBGCP2 SPRNP1 ZNF511 FUOM CALY CYP2E1 MIR3944 FRG2B PRAP1 PAOX
nsv1037772 Chr.10:133263092 - 133403671 on Build GRCh38 Gain ECHS1 ADAM8 ZNF511 FUOM CALY MIR3944 MTG1 PRAP1 TUBGCP2 PAOX
nsv528260 Chr.10:132859348 - 133620799 on Build GRCh38 Loss VENTX LINC01167 LINC01168 ADAM8 MTG1 MIR202HG ADGRA1 ZNF511 FUOM MIR202 ECHS1 SPRN SCART1 CFAP46 KNDC1 SYCE1 TUBGCP2 SPRNP1 ADGRA1-AS1 CALY CYP2E1 MIR3944 PRAP1 UTF1 PAOX LINC01166
esv2750853 Chr.10:133266358 - 133621047 on Build GRCh38 Gain ECHS1 SPRN SCART1 ADAM8 SYCE1 MTG1 TUBGCP2 SPRNP1 ZNF511 FUOM CALY CYP2E1 MIR3944 PRAP1 PAOX
nsv527785 Chr.10:133344451 - 133402966 on Build GRCh38 Loss ECHS1 FUOM MIR3944 MTG1 PRAP1 PAOX
dgv3e196 Chr.10:133266297 - 133450541 on Build GRCh38 Duplication ECHS1 SPRN ADAM8 ZNF511 FUOM CALY MIR3944 MTG1 PRAP1 TUBGCP2 PAOX
nsv832040 Chr.10:133301560 - 133412641 on Build GRCh38 Loss ECHS1 ZNF511 FUOM CALY MIR3944 MTG1 PRAP1 TUBGCP2 PAOX
nsv552589 Chr.10:133257500 - 133563944 on Build GRCh38 Gain ECHS1 SPRN SCART1 ADAM8 SYCE1 MTG1 TUBGCP2 ZNF511 FUOM CALY CYP2E1 MIR3944 PRAP1 PAOX

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More Information


Additional Information:

For this assay, SNP(s) [rs57719627] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

oxidase

Gene Ontology Categories:

Function(s) Process(es)


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