Hs01161990_cn

• Gene Symbol: GPRC5C
• Assay Reference Genome Location: Chr.17:74433732 on build GRCh38
• Cytoband: 17q25.1

Target Gene Details

• Entrez Gene ID: 55890
• Gene Name: G protein-coupled receptor class C group 5 member C
• Gene Aliases: RAIG-3, RAIG3
• Location: Chr.17:74431341-74451658 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GPRC5C	NM_018653.3			NP_061123.3
	NM_022036.2			NP_071319.2
	XM_005257512.1			XP_005257569.1
	XM_005257514.1			XP_005257571.1
	XM_017024855.1			XP_016880344.1
	XM_017024856.1			XP_016880345.1
	AF207989.1			AAF72870.1
	AJ276102.1			CAC00633.1
	AK000249.1			BAA91030.1
	AK075397.1			BAC11595.1
	AK131210.1
	AK222909.1
	BC004925.1			AAH04925.1
	BC110848.1			AAI10849.1
	BC125080.1
	BC125081.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv12e196	Chr.17:73675043 - 74565539 on Build GRCh38	Duplication	KIF19 CD300A LOC400620 RPL38 TTYH2 CD300C DNAI2 LOC100130520 MGC16275 BTBD17 LINC00469 GPRC5C LOC100134391 GPR142 CD300LB
esv3641237	Chr.17:74241755 - 74451924 on Build GRCh38	Gain	KIF19 GPRC5C GPR142 TTYH2 DNAI2 BTBD17
nsv833539	Chr.17:74252536 - 74437326 on Build GRCh38	Loss	KIF19 GPRC5C GPR142 TTYH2 DNAI2 BTBD17
esv2761978	Chr.17:73835799 - 74684915 on Build GRCh38	Gain	CD300LD KIF19 CD300A CD300E RPL38 TTYH2 CD300C DNAI2 LOC100130520 MGC16275 LOC101928343 BTBD17 GPRC5C GPR142 C17orf77 RAB37 CD300LB
esv3641230	Chr.17:73831787 - 74694861 on Build GRCh38	Gain	CD300LD KIF19 CD300A CD300E RPL38 TTYH2 CD300C DNAI2 LOC100130520 MGC16275 LOC101928343 BTBD17 GPRC5C GPR142 C17orf77 RAB37 CD300LB CD300LF
dgv3282n100	Chr.17:73814343 - 74719597 on Build GRCh38	Gain	CD300LD KIF19 CD300A CD300E RPL38 TTYH2 CD300C DNAI2 LOC100130520 MGC16275 LOC101928343 BTBD17 LINC00469 GPRC5C GPR142 C17orf77 RAB37 CD300LB CD300LF
esv33995	Chr.17:74261053 - 74732093 on Build GRCh38	Loss	CD300LD KIF19 CD300A CD300E TTYH2 CD300C DNAI2 LOC100130520 LOC101928343 BTBD17 GPRC5C GPR142 C17orf77 RAB37 CD300LB CD300LF
nsv517569	Chr.17:73837862 - 74685802 on Build GRCh38	Gain+Loss	CD300LD KIF19 CD300A CD300E RPL38 TTYH2 CD300C DNAI2 LOC100130520 MGC16275 LOC101928343 BTBD17 GPRC5C GPR142 C17orf77 RAB37 CD300LB
dgv5768n54	Chr.17:73826016 - 74706775 on Build GRCh38	Gain	CD300LD KIF19 CD300A CD300E RPL38 TTYH2 CD300C DNAI2 LOC100130520 MGC16275 LOC101928343 BTBD17 LINC00469 GPRC5C GPR142 C17orf77 RAB37 CD300LB CD300LF
nsv952366	Chr.17:74429862 - 74456261 on Build GRCh38	Deletion	GPRC5C
esv3573820	Chr.17:73817932 - 74694378 on Build GRCh38	Gain	CD300LD KIF19 CD300A CD300E RPL38 TTYH2 CD300C DNAI2 LOC100130520 MGC16275 LOC101928343 BTBD17 LINC00469 GPRC5C GPR142 C17orf77 RAB37 CD300LB CD300LF
dgv5774n54	Chr.17:74428381 - 74673021 on Build GRCh38	Gain	CD300LD GPRC5C CD300A C17orf77 CD300E CD300C RAB37 LOC100130520 CD300LB LOC101928343

More Information

Additional Information:

For this assay, SNP(s) [rs118019667] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

G-protein coupled receptor

Gene Ontology Categories:

Process(es)

G-protein coupled receptor signaling pathway

Function(s)

G-protein coupled receptor activity